Miyakogusa Predicted Gene
- Lj3g3v0030640.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0030640.1 Non Chatacterized Hit- tr|I1MCC8|I1MCC8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33259
PE,69.23,0.0000000000006,BRAP2,BRCA1-associated 2; zf-UBP,Zinc finger,
UBP-type; zf-RING_2,Zinc finger, RING-type; RING/U-box,CUFF.40217.1
(1404 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58274 similar to UniRef100_A7QCT0 Cluster: Chromosome... 1501 0.0
gnl|LJGI|TC62974 weakly similar to UniRef100_A7QCT0 Cluster: Chr... 852 0.0
>gnl|LJGI|TC58274 similar to UniRef100_A7QCT0 Cluster: Chromosome undetermined
scaffold_79, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_79, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (47%)
Length = 896
Score = 1501 bits (757), Expect = 0.0
Identities = 757/757 (100%)
Strand = Plus / Plus
Query: 1 atgtggaactctaacaccgcgtcggagattgaaccgtcatcgtcatcatcatcatcgtcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atgtggaactctaacaccgcgtcggagattgaaccgtcatcgtcatcatcatcatcgtcg 199
Query: 61 ttctccaccacgctcttcaatttctcttctggaaaccctagaatcgaagaaactcgcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttctccaccacgctcttcaatttctcttctggaaaccctagaatcgaagaaactcgcggc 259
Query: 121 ctcatgcatctcatccccgccgacgccaccaccaccaccgcccctccctctcttccggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctcatgcatctcatccccgccgacgccaccaccaccaccgcccctccctctcttccggtt 319
Query: 181 gatcggaaaccgctcgtgtgtgtcgtcggagttccgaatcacatgacctatgcggatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gatcggaaaccgctcgtgtgtgtcgtcggagttccgaatcacatgacctatgcggatttc 379
Query: 241 tgccaattctgcggctcgttcattcaccacattctcgagatgcgcattgtcaggatggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgccaattctgcggctcgttcattcaccacattctcgagatgcgcattgtcaggatggat 439
Query: 301 ggaatggaggatcactacagtgtcttgatccgttttgatgaacagcaatatgctgatact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggaatggaggatcactacagtgtcttgatccgttttgatgaacagcaatatgctgatact 499
Query: 361 ttctacacacactacaatggtcgtcgtttctcatctcttgaggttgaggagtgtcgtgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttctacacacactacaatggtcgtcgtttctcatctcttgaggttgaggagtgtcgtgtt 559
Query: 421 cttttcacattggatgtgcagtacactggctcaattgaacatgctcaaccatccagtgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttttcacattggatgtgcagtacactggctcaattgaacatgctcaaccatccagtgct 619
Query: 481 agctcaactgaacagcctacatgtcctgtatgcctcgagcggttagatcaagacacgagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agctcaactgaacagcctacatgtcctgtatgcctcgagcggttagatcaagacacgagt 679
Query: 541 ggaattcttacaaccatatgcaatcattctttccattgttcttgcatttcaaaatgggca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggaattcttacaaccatatgcaatcattctttccattgttcttgcatttcaaaatgggca 739
Query: 601 gattcctcttgtcctgtatgccgctactgtcagcagcaagccgaaaaatctatatgtttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gattcctcttgtcctgtatgccgctactgtcagcagcaagccgaaaaatctatatgtttt 799
Query: 661 gtttgtcagaccactgagaacctttggatatgtgttatatgtgggtttgttgggtgtgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gtttgtcagaccactgagaacctttggatatgtgttatatgtgggtttgttgggtgtgga 859
Query: 721 agatacaaaggtggacatgccataatacactggaaag 757
|||||||||||||||||||||||||||||||||||||
Sbjct: 860 agatacaaaggtggacatgccataatacactggaaag 896
>gnl|LJGI|TC62974 weakly similar to UniRef100_A7QCT0 Cluster: Chromosome undetermined
scaffold_79, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_79, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(23%)
Length = 724
Score = 852 bits (430), Expect = 0.0
Identities = 430/430 (100%)
Strand = Plus / Plus
Query: 975 caacgaatataatgaattgctggccagtcaacttgaaaaccaaaaattgtattttgaatc 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caacgaatataatgaattgctggccagtcaacttgaaaaccaaaaattgtattttgaatc 60
Query: 1035 cttattacaagaagtaaaagaagaaactgaaaggaaaatttcccaaggcgttcagaaggc 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttattacaagaagtaaaagaagaaactgaaaggaaaatttcccaaggcgttcagaaggc 120
Query: 1095 tgtcagtcttaaacagcagaagattcaggccaagatcgacagatttaacaaagaaaagaa 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtcagtcttaaacagcagaagattcaggccaagatcgacagatttaacaaagaaaagaa 180
Query: 1155 atttctggaggagattaatgagaatcttgtgaaaaatggggagatttggaaagcaaagtt 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atttctggaggagattaatgagaatcttgtgaaaaatggggagatttggaaagcaaagtt 240
Query: 1215 acttgagattgaagagagggagaagaaaacattaaaactgaataatgatagattaacagg 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acttgagattgaagagagggagaagaaaacattaaaactgaataatgatagattaacagg 300
Query: 1275 cctggaaaagcagcttagtgatctcatgatttgtctcgagggagggaagactgtgcccgt 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctggaaaagcagcttagtgatctcatgatttgtctcgagggagggaagactgtgcccgt 360
Query: 1335 gtcaaatgaaattaaagatgaaactgtctttgacaactcaaaagaatcgtcgtcaactaa 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcaaatgaaattaaagatgaaactgtctttgacaactcaaaagaatcgtcgtcaactaa 420
Query: 1395 aggctcttag 1404
||||||||||
Sbjct: 421 aggctcttag 430