Miyakogusa Predicted Gene

Lj3g3v0028550.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0028550.1 Non Chatacterized Hit- tr|I1HYJ0|I1HYJ0_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,36.56,5e-19,zf-RanBP,Zinc finger, RanBP2-type; Zinc finger
domain,Zinc finger, RanBP2-type; Ran BP2/NZF zinc fin,CUFF.40209.1
         (426 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO025762 similar to UniRef100_Q6Z6E6 Cluster: Zinc fing...   844   0.0  

>gnl|LJGI|GO025762 similar to UniRef100_Q6Z6E6 Cluster: Zinc finger transcription
           factor ZFP30; n=1; Oryza sativa Japonica Group|Rep: Zinc
           finger transcription factor ZFP30 - Oryza sativa subsp.
           japonica (Rice), partial (23%)
          Length = 641

 Score =  844 bits (426), Expect = 0.0
 Identities = 426/426 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagctggtctggaggagattggatgtgtggtgcttgccagcacgtaaatttcaagaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atgagctggtctggaggagattggatgtgtggtgcttgccagcacgtaaatttcaagaag 162

                                                                       
Query: 61  agggaacaatgccaaagttgtgcataccccaaatatggaggccctgacccagcaacctac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 agggaacaatgccaaagttgtgcataccccaaatatggaggccctgacccagcaacctac 222

                                                                       
Query: 121 agatacaacaggactgaaactttggcaggggactggtattgctccgctatgaactgtgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 agatacaacaggactgaaactttggcaggggactggtattgctccgctatgaactgtgga 282

                                                                       
Query: 181 gctcacaactatgcaagcagatcaaactgctatagatgtggtacaatgagggatgattat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gctcacaactatgcaagcagatcaaactgctatagatgtggtacaatgagggatgattat 342

                                                                       
Query: 241 tcttctggatatggggggaacatggcaggctctggaggatatggatctgattgcagtttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcttctggatatggggggaacatggcaggctctggaggatatggatctgattgcagtttc 402

                                                                       
Query: 301 ccacctggatggaagagtggagattggatttgccctagaattggctgtggagtgcataat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ccacctggatggaagagtggagattggatttgccctagaattggctgtggagtgcataat 462

                                                                       
Query: 361 tatgctagcagggcagaatgcttcaagtgcaaaatgccaagggactttggtggggaagat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tatgctagcagggcagaatgcttcaagtgcaaaatgccaagggactttggtggggaagat 522

                 
Query: 421 tgaaac 426
           ||||||
Sbjct: 523 tgaaac 528