Miyakogusa Predicted Gene

Lj3g3v0017520.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0017520.1 tr|G7JFP1|G7JFP1_MEDTR DNA-directed RNA
polymerase OS=Medicago truncatula GN=MTR_4g009200 PE=3
SV=1,38.5,0.000000000000001,seg,NULL,CUFF.40203.1
         (468 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80787 similar to UniRef100_A7P5Z7 Cluster: Chromosome...   672   0.0  

>gnl|LJGI|TC80787 similar to UniRef100_A7P5Z7 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 612

 Score =  672 bits (339), Expect = 0.0
 Identities = 339/339 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtgtgaccacgatgactgggtcaacctcgccatggccgatgactccaccgtcgccggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  atgtgtgaccacgatgactgggtcaacctcgccatggccgatgactccaccgtcgccggc 123

                                                                       
Query: 61  ctcctcctcaacctccaccaccgccctcatcctcacctccactggaccgtccgccagcgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ctcctcctcaacctccaccaccgccctcatcctcacctccactggaccgtccgccagcgc 183

                                                                       
Query: 121 cgctccacgcacaaaacctcccccgccaccaccagggccagccccaccactcccctctcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cgctccacgcacaaaacctcccccgccaccaccagggccagccccaccactcccctctcc 243

                                                                       
Query: 181 tggagcggcgccgccacgtcagtcagctgcggcgcaaacaacgtcgatagccacgaggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tggagcggcgccgccacgtcagtcagctgcggcgcaaacaacgtcgatagccacgaggag 303

                                                                       
Query: 241 gagtctagccacctcacaaaacatgccggagcatcaagatctgataaggttgctaatcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gagtctagccacctcacaaaacatgccggagcatcaagatctgataaggttgctaatcca 363

                                                  
Query: 301 agtgaaacagtcactactaaaaaggcaagaagaaaaaag 339
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agtgaaacagtcactactaaaaaggcaagaagaaaaaag 402



 Score =  260 bits (131), Expect = 7e-69
 Identities = 134/135 (99%)
 Strand = Plus / Plus

                                                                       
Query: 334 aaaaaggaactggcatctttgcgtattactgttgaccaacagatagccacaaatgaaagc 393
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aaaaatgaactggcatctttgcgtattactgttgaccaacagatagccacaaatgaaagc 519

                                                                       
Query: 394 ttaaagaaaatgaagcttgatttggacttgcgacagaactcaaatacaactacaacctcc 453
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ttaaagaaaatgaagcttgatttggacttgcgacagaactcaaatacaactacaacctcc 579

                          
Query: 454 gaagtgtctgggaaa 468
           |||||||||||||||
Sbjct: 580 gaagtgtctgggaaa 594