Miyakogusa Predicted Gene
- Lj3g3v0014470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0014470.1 Non Chatacterized Hit- tr|C6T5S0|C6T5S0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36899
PE,80.53,0,DNA-binding domain,DNA-binding, integrase-type;
AP2_ERF,AP2/ERF domain; DNA-binding domain in plant ,CUFF.40199.1
(558 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57807 homologue to UniRef100_A7P5Z2 Cluster: Chromoso... 301 2e-81
gnl|LJGI|TC71562 homologue to UniRef100_A7P5Z2 Cluster: Chromoso... 121 5e-27
gnl|LJGI|TC79408 similar to UniRef100_Q3E958 Cluster: Ethylene-r... 58 6e-08
gnl|LJGI|TC65658 similar to UniRef100_Q5N965 Cluster: AP2 domain... 54 9e-07
>gnl|LJGI|TC57807 homologue to UniRef100_A7P5Z2 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 1012
Score = 301 bits (152), Expect = 2e-81
Identities = 270/307 (87%), Gaps = 3/307 (0%)
Strand = Plus / Plus
Query: 1 atggctagaccccaacaacgctatcgtggtgttcgtcagaggcattggggctcttgggtc 60
|||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||
Sbjct: 94 atggctagaccccaacaacgctatcgtggtgtccgccagagacactggggctcttgggtc 153
Query: 61 tctgaaattcgccaccctcttttgaagacaagaatatggctaggaacatttgaaacagca 120
|||||||||||||||||| | || ||||||||||||||||||||||| || ||||||||
Sbjct: 154 tctgaaattcgccaccctttattaaagacaagaatatggctaggaaccttcgaaacagct 213
Query: 121 gaagatgcagcaagagcctatgatgaagcagcaaggttcatgtgtgggccaaaagcaaga 180
|| |||||||||||||| || ||||||||||| ||| |||||||||| ||||||||| |
Sbjct: 214 gaggatgcagcaagagcgtacgatgaagcagccaggctcatgtgtggtccaaaagcacgc 273
Query: 181 accaatttcccatacaatcccaatgagccacattcatcttcagctaagcttctctctgca 240
|||||||||||||||||| | || | | | ||| || ||| | |||||||||||||||
Sbjct: 274 accaatttcccatacaatgc--atcactctc-ttcttcatcatcgaagcttctctctgca 330
Query: 241 actttgactgctaagctgcacaagtgtcatatggcctcactttcccttcaaatggccaag 300
||||| ||||||||||| |||||||| || ||||| || ||||||||||||||||| |||
Sbjct: 331 actttaactgctaagctacacaagtgccacatggcttccctttcccttcaaatggcaaag 390
Query: 301 cagaaac 307
|||||||
Sbjct: 391 cagaaac 397
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 481 gttcttgcagatgatcacatagaacagatgattcaggagttgctagattatggctccatt 540
||||||| |||||||||||| || |||||||| ||||||||||| |||||||| || |||
Sbjct: 568 gttcttgaagatgatcacattgagcagatgatacaggagttgcttgattatgggtcaatt 627
Query: 541 gagctt 546
||||||
Sbjct: 628 gagctt 633
>gnl|LJGI|TC71562 homologue to UniRef100_A7P5Z2 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 488
Score = 121 bits (61), Expect = 5e-27
Identities = 181/221 (81%)
Strand = Plus / Plus
Query: 40 aggcattggggctcttgggtctctgaaattcgccaccctcttttgaagacaagaatatgg 99
||||||||||||||||||||||| |||||||| |||||| | ||||| || || ||||||
Sbjct: 130 aggcattggggctcttgggtctccgaaattcgacaccctatattgaaaactaggatatgg 189
Query: 100 ctaggaacatttgaaacagcagaagatgcagcaagagcctatgatgaagcagcaaggttc 159
|| || ||||||||||| || || |||||||| ||||| || |||||||| || ||| |
Sbjct: 190 cttgggacatttgaaactgctgaggatgcagctagagcatacgatgaagccgcgaggcta 249
Query: 160 atgtgtgggccaaaagcaagaaccaatttcccatacaatcccaatgagccacattcatct 219
||||| || | | ||||||||| || ||||| ||||| ||||||| | | || || ||
Sbjct: 250 atgtgcggtgcgagagcaagaacaaacttcccttacaaccccaatgcgtctcagtcttca 309
Query: 220 tcagctaagcttctctctgcaactttgactgctaagctgca 260
|| | ||||||||||| |||||||| |||||||| |||||
Sbjct: 310 tcttccaagcttctctcagcaactttaactgctaaactgca 350
>gnl|LJGI|TC79408 similar to UniRef100_Q3E958 Cluster: Ethylene-responsive
transcription factor SHINE 3; n=1; Arabidopsis
thaliana|Rep: Ethylene-responsive transcription factor
SHINE 3 - Arabidopsis thaliana (Mouse-ear cress),
partial (65%)
Length = 943
Score = 58.0 bits (29), Expect = 6e-08
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 46 tggggctcttgggtctctgaaattcgccaccctcttttgaagacaagaatatggctagga 105
|||||||| ||||| || || ||||||||||| | |||||| ||| | |||||||||
Sbjct: 182 tggggctcctgggtgtcagagattcgccacccattactgaagagaagggtgtggctagga 241
Query: 106 acatttgaaacagcagaagatgcagcaagagcctatgatgaagcagcaa 154
|||||||| |||||||| | |||||||| || ||||| |||||||||
Sbjct: 242 acatttgagacagcagaggcagcagcaagggcatatgaccaagcagcaa 290
>gnl|LJGI|TC65658 similar to UniRef100_Q5N965 Cluster: AP2 domain transcription
factor-like; n=2; Oryza sativa|Rep: AP2 domain
transcription factor-like - Oryza sativa subsp. japonica
(Rice), partial (21%)
Length = 921
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 97 tggctaggaacatttgaaacagcagaagatgcagc 131
||||||||||| |||||||||||||| ||||||||
Sbjct: 400 tggctaggaacctttgaaacagcagaggatgcagc 434