Miyakogusa Predicted Gene
- Lj3g3v0014460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0014460.1 Non Chatacterized Hit- tr|K4AS80|K4AS80_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,50,6e-19,seg,NULL; ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN,NULL;
ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAIN,CUFF.40197.1
(724 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036303 similar to UniRef100_A7Q919 Cluster: Chromosom... 1084 0.0
gnl|LJGI|BP031044 76 3e-13
>gnl|LJGI|GO036303 similar to UniRef100_A7Q919 Cluster: Chromosome chr9 scaffold_65,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_65, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 612
Score = 1084 bits (547), Expect = 0.0
Identities = 554/555 (99%), Gaps = 1/555 (0%)
Strand = Plus / Plus
Query: 1 atggaccttctaaggtcagaaccatgtccatctgataacttgaacatctcattctcagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 atggaccttctaaggtcagaaccatgtccatctgataacttgaacatctcattctcagac 117
Query: 61 tcaatatcttcattcgatatccaaacagagaaaagacagagagaaaaggaagatcaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tcaatatcttcattcgatatccaaacagagaaaagacagagagaaaaggaagatcaacaa 177
Query: 121 catccacatgagtcagcaccacgccttctacttgatctaagtctccccagtgaatattca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 catccacatgagtcagcaccacgccttctacttgatctaagtctccccagtgaatattca 237
Query: 181 ggtgaaaactcaaagccagaactcaatcttatcaattgctttgatacaaatttgtccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ggtgaaaactcaaagccagaactcaatcttatcaattgctttgatacaaatttgtccaca 297
Query: 241 aactcctcagaatctgttgttcatggtaatgaagtagagccccggattttctcatgcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aactcctcagaatctgttgttcatggtaatgaagtagagccccggattttctcatgcaac 357
Query: 301 tattgccaaagacagttttatagctcacaggctcttggaggacaccagaatgcacataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tattgccaaagacagttttatagctcacaggctcttggaggacaccagaatgcacataaa 417
Query: 361 cgtgaaagaactctggcaaaaagaggacacagagtttcttcagtagattttggacaaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 cgtgaaagaactctggcaaaaagaggacacagagtttcttcagtagattttggacaaagg 477
Query: 421 tactccagcatggcttctctgcctttgcatggaattcaggtgcattctatgattcacaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tactccagcatggcttctctgcctttgcatggaattcaggtgcattctatgattcacaaa 537
Query: 481 ccttcttacaaaacaccc-ttttttgggtggaagaagcagcgtaaagaaattggaaattt 539
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ccttcttacaaaacaccctttttttgggtggaagaagcagcgtaaagaaattggaaattt 597
Query: 540 tggtggtgttggggc 554
|||||||||||||||
Sbjct: 598 tggtggtgttggggc 612
>gnl|LJGI|BP031044
Length = 381
Score = 75.8 bits (38), Expect = 3e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 687 tgagttgcagaagcttgacttgtcccttaaactctaag 724
||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagttgcagaagcttgacttgtcccttaaactctaag 344