Miyakogusa Predicted Gene

Lj3g3v0012340.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0012340.1 CUFF.40186.1
         (237 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57758                                                      454   e-127

>gnl|LJGI|TC57758 
          Length = 904

 Score =  454 bits (229), Expect = e-127
 Identities = 235/237 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcatcattgggcacttcgaaagggattctagagattgccaagtttggggtgtatgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atgtcatcattgggcacttcgaaagggattctagagattgccaagtttggggtgtatgta 478

                                                                       
Query: 61  actgtccccatcgttctgatgtacaccttcgctaactataccaacaactacctccacaag 120
           |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 479 actgtccccatcgttctgatgtacaccttcgctaacaacaccaacaactacctccacaag 538

                                                                       
Query: 121 ttcattggaaaaaagtcatacgttgaatacccccgggatttagaaaggccaccatcaccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttcattggaaaaaagtcatacgttgaatacccccgggatttagaaaggccaccatcaccg 598

                                                                    
Query: 181 gaggaacttagggagaaggcacgcgagctggctcataaaaggaacaattcatgatgt 237
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gaggaacttagggagaaggcacgcgagctggctcataaaaggaacaattcatgatgt 655