Miyakogusa Predicted Gene
- Lj3g3v0012330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0012330.1 tr|B9HK79|B9HK79_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_563484 PE=4
SV=1,82.98,0.00000000000003,ACT-like,NULL,CUFF.40191.1
(876 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76389 similar to UniRef100_A7PVK1 Cluster: Chromosome... 1737 0.0
gnl|LJGI|TC73066 similar to UniRef100_A7PVK1 Cluster: Chromosome... 702 0.0
>gnl|LJGI|TC76389 similar to UniRef100_A7PVK1 Cluster: Chromosome chr9 scaffold_33,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_33, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 1301
Score = 1737 bits (876), Expect = 0.0
Identities = 876/876 (100%)
Strand = Plus / Plus
Query: 1 atggctgtggctatggctgcttgcagccttggacttcacttgtgtgctgataacagcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atggctgtggctatggctgcttgcagccttggacttcacttgtgtgctgataacagcttg 219
Query: 61 agagctttggaaaaaaccatttggggtgcccctgtcttgaaagtctcatctatctctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 agagctttggaaaaaaccatttggggtgcccctgtcttgaaagtctcatctatctctgat 279
Query: 121 actaccaaaccatgttacattcttcacaaaacaagattatcatcttcaaggattacaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 actaccaaaccatgttacattcttcacaaaacaagattatcatcttcaaggattacaatc 339
Query: 181 atcccacgagcaacagctgttactgatgtggagggtggaaatcaagatgagactgatact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atcccacgagcaacagctgttactgatgtggagggtggaaatcaagatgagactgatact 399
Query: 241 gttccaactccagtagttataattgatcaagattctgatacagatgcaactgtggtggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gttccaactccagtagttataattgatcaagattctgatacagatgcaactgtggtggag 459
Query: 301 ataacctttggtgatcgcctgggggctcttcttgacactatgaatgcattgaagaactta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ataacctttggtgatcgcctgggggctcttcttgacactatgaatgcattgaagaactta 519
Query: 361 gggctcaatgttgtcaaggcaaatgtctatctggactcctctggcaagcacaacaagttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gggctcaatgttgtcaaggcaaatgtctatctggactcctctggcaagcacaacaagttc 579
Query: 421 gccatcacaaaagctgatactggtagaaaggtggatgatccagagttgttagaggcaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gccatcacaaaagctgatactggtagaaaggtggatgatccagagttgttagaggcaatc 639
Query: 481 cgaatgacaattttaaataacatgattcagtatcacccggaatcaagcgctcagttagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cgaatgacaattttaaataacatgattcagtatcacccggaatcaagcgctcagttagct 699
Query: 541 ctaggagcagcttttggacttgttcctccaaaggagcaggttgatgtggacatagcaacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ctaggagcagcttttggacttgttcctccaaaggagcaggttgatgtggacatagcaacc 759
Query: 601 cacttaaccatctctgatgacggcccggatcgaagtttgctgtatgtggagacagctgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 cacttaaccatctctgatgacggcccggatcgaagtttgctgtatgtggagacagctgat 819
Query: 661 cgccctggattactgctggatcttgtacagattattactgatattaatattgcagttgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 cgccctggattactgctggatcttgtacagattattactgatattaatattgcagttgaa 879
Query: 721 tccggagaatttgacactgagggactcttggcaaaggcaaagtttcatgttagctacaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 tccggagaatttgacactgagggactcttggcaaaggcaaagtttcatgttagctacaag 939
Query: 781 ggtaaagccatcatcaagcctctacaagaggttcttgctaacagcttgagatattacttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 ggtaaagccatcatcaagcctctacaagaggttcttgctaacagcttgagatattacttg 999
Query: 841 aggcgaccttcaactgaggaatccagtttttaagag 876
||||||||||||||||||||||||||||||||||||
Sbjct: 1000 aggcgaccttcaactgaggaatccagtttttaagag 1035
>gnl|LJGI|TC73066 similar to UniRef100_A7PVK1 Cluster: Chromosome chr9 scaffold_33,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_33, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 1224
Score = 702 bits (354), Expect = 0.0
Identities = 639/734 (87%)
Strand = Plus / Plus
Query: 143 ttcacaaaacaagattatcatcttcaaggattacaatcatcccacgagcaacagctgtta 202
|||||||| |||||| |||||||| | | |||| | ||||| |||||| || |||||
Sbjct: 276 ttcacaaaggaagattgtcatcttctggaactacatttatccctcgagcagcacctgttg 335
Query: 203 ctgatgtggagggtggaaatcaagatgagactgatactgttccaactccagtagttataa 262
|||||||||||| ||||||||||| |||||||||||| ||||||| || |||||||||
Sbjct: 336 ctgatgtggaggatggaaatcaaggtgagactgataccattccaacccccatagttataa 395
Query: 263 ttgatcaagattctgatacagatgcaactgtggtggagataacctttggtgatcgcctgg 322
|||| ||||| |||||| ||||||||||||||||||||||||| ||||||||| | || |
Sbjct: 396 ttgaccaagactctgatccagatgcaactgtggtggagataacttttggtgataggctcg 455
Query: 323 gggctcttcttgacactatgaatgcattgaagaacttagggctcaatgttgtcaaggcaa 382
|||||||||||||||| ||||| ||||| || | |||||| ||||||||||| |||||||
Sbjct: 456 gggctcttcttgacacaatgaacgcattaaaaagcttaggtctcaatgttgttaaggcaa 515
Query: 383 atgtctatctggactcctctggcaagcacaacaagttcgccatcacaaaagctgatactg 442
|||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 516 atgtctttttggactcctctggcaagcacaacaagtttgccatcacaaaagctgatactg 575
Query: 443 gtagaaaggtggatgatccagagttgttagaggcaatccgaatgacaattttaaataaca 502
| ||||| || || || || ||||||||||||||||| || |||||||| |||||||
Sbjct: 576 gcagaaaagttgaagagccggagttgttagaggcaattcgtttgacaattataaataatc 635
Query: 503 tgattcagtatcacccggaatcaagcgctcagttagctctaggagcagcttttggacttg 562
|| |||||||||||||||||||||| ||| |||||| | ||||||||||||||||||
Sbjct: 636 tgcttcagtatcacccggaatcaagttctctgttagcaatgggagcagcttttggacttc 695
Query: 563 ttcctccaaaggagcaggttgatgtggacatagcaacccacttaaccatctctgatgacg 622
| |||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||| |
Sbjct: 696 tacctccaaaagagcaggttgatgtggacatagcaacccacataagcatttctgatgatg 755
Query: 623 gcccggatcgaagtttgctgtatgtggagacagctgatcgccctggattactgctggatc 682
|||| ||| |||||||||||||||||||| |||||||| | |||||||||||| | ||||
Sbjct: 756 gcccagatagaagtttgctgtatgtggaggcagctgataggcctggattactggtagatc 815
Query: 683 ttgtacagattattactgatattaatattgcagttgaatccggagaatttgacactgagg 742
||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| |||||||
Sbjct: 816 ttgtaaagattattactgacattgacattgctgtcgaatctggagaatttgatactgagg 875
Query: 743 gactcttggcaaaggcaaagtttcatgttagctacaagggtaaagccatcatcaagcctc 802
| || ||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 876 ggctgttggctaaggcgaagttccatgttagctacaagggtaaagcaatcatcaagcctc 935
Query: 803 tacaagaggttcttgctaacagcttgagatattacttgaggcgaccttcaactgaggaat 862
| || ||||||||||||||||||| ||||||| |||||||| || ||||||||||||
Sbjct: 936 tccagcaggttcttgctaacagcttaagatattttttgaggcgtccgacaactgaggaat 995
Query: 863 ccagtttttaagag 876
| ||||||| ||||
Sbjct: 996 ctagtttttgagag 1009