Miyakogusa Predicted Gene

Lj3g3v0012240.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0012240.1 Non Chatacterized Hit- tr|I1MCA3|I1MCA3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.36,9e-19,
,CUFF.40178.1
         (175 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62234 weakly similar to UniRef100_A7Q4Z7 Cluster: Chr...   347   1e-95
gnl|LJGI|TC74923 similar to UniRef100_Q4RZA0 Cluster: Chromosome...    86   8e-17

>gnl|LJGI|TC62234 weakly similar to UniRef100_A7Q4Z7 Cluster: Chromosome undetermined
           scaffold_51, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_51, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (98%)
          Length = 779

 Score =  347 bits (175), Expect = 1e-95
 Identities = 175/175 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtataatcaagagttgcttctctttcataacagggacagtctgtggtgtttacttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atgggtataatcaagagttgcttctctttcataacagggacagtctgtggtgtttacttg 218

                                                                       
Query: 61  gcccagaattataagcttcccgacatcaccaaggtagctgacactgccttgttcatggcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gcccagaattataagcttcccgacatcaccaaggtagctgacactgccttgttcatggcg 278

                                                                  
Query: 121 aaaatcattgaggaaagctaccgcaaacccaagaagagggatgatgatgattagt 175
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aaaatcattgaggaaagctaccgcaaacccaagaagagggatgatgatgattagt 333


>gnl|LJGI|TC74923 similar to UniRef100_Q4RZA0 Cluster: Chromosome 1 SCAF14944, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome 1 SCAF14944, whole genome
           shotgun sequence - Tetraodon nigroviridis (Green
           puffer), partial (16%)
          Length = 618

 Score = 85.7 bits (43), Expect = 8e-17
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtataatcaagagttgcttctctttcataacagggacagtctgtggtgtttacttg 60
           ||||||||||||| ||||||||||||| ||||| ||||||||||||  || |||||||||
Sbjct: 206 atgggtataatcaggagttgcttctctctcatagcagggacagtcttcggggtttacttg 265

                      
Query: 61  gcccagaatta 71
           || ||||||||
Sbjct: 266 gctcagaatta 276