Miyakogusa Predicted Gene
- Lj3g3v0002180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0002180.1 Non Chatacterized Hit- tr|K4BLR8|K4BLR8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,44.19,0.00000000000003,ZF_RING_2,Zinc finger, RING-type;
seg,NULL; no description,Zinc finger, RING/FYVE/PHD-type,CUFF.40174.1
(2184 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS328315 similar to UniRef100_A2DGS8 Cluster: Clan CA ... 916 0.0
gnl|LJGI|FS354655 weakly similar to UniRef100_A0DQ34 Cluster: Ch... 634 0.0
>gnl|LJGI|FS328315 similar to UniRef100_A2DGS8 Cluster: Clan CA family C19 ubiquitin
hydrolase-like cysteine peptidase; n=1; Trichomonas,
partial (0%)
Length = 607
Score = 916 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Plus
Query: 1 atgacaaagacaagtgaagagttttggttaaacttaatgaattccgattctgctaaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atgacaaagacaagtgaagagttttggttaaacttaatgaattccgattctgctaaccat 205
Query: 61 gatgatgctactgctaccacccctttacctgtgctttcagtgtctccttctcccctcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gatgatgctactgctaccacccctttacctgtgctttcagtgtctccttctcccctcttg 265
Query: 121 aatatgaatgaaacatcttctctattttacagccaggaacaacatggaggtagttccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aatatgaatgaaacatcttctctattttacagccaggaacaacatggaggtagttccatg 325
Query: 181 actgctgtttcgtctcagttcgggggttctcagaattcccagatggaccccagttgctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 actgctgtttcgtctcagttcgggggttctcagaattcccagatggaccccagttgctta 385
Query: 241 tatgaaggacaggaacatgtatcccttccgtgtccggtaggatacatggggtggccatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tatgaaggacaggaacatgtatcccttccgtgtccggtaggatacatggggtggccatat 445
Query: 301 caatattctaggcatggtgatctaccaatctctgatgatgtgacgaatgttaacttcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 caatattctaggcatggtgatctaccaatctctgatgatgtgacgaatgttaacttcaat 505
Query: 361 ttgaatagttctgtgaagcctgacagtgatggaaaatgtgtgaccccaatggatagtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttgaatagttctgtgaagcctgacagtgatggaaaatgtgtgaccccaatggatagtttg 565
Query: 421 gccaccaggcttcaaatgggcacccctagtggaacagcaatg 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gccaccaggcttcaaatgggcacccctagtggaacagcaatg 607
>gnl|LJGI|FS354655 weakly similar to UniRef100_A0DQ34 Cluster: Chromosome undetermined
scaffold_6, whole genome shotgun sequence; n=1;
Paramecium tetraurelia|Rep: Chromosome undetermined
scaffold_6, whole genome shotgun sequence - Paramecium
tetraurelia, partial (3%)
Length = 615
Score = 634 bits (320), Expect = 0.0
Identities = 320/320 (100%)
Strand = Plus / Minus
Query: 1865 taaaccaacaacagttgatagctcaatctcttgctcgccaacggttgatgaatcaaatta 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 taaaccaacaacagttgatagctcaatctcttgctcgccaacggttgatgaatcaaatta 554
Query: 1925 tacaatctactcctgctactgctcacaattatatcaagtataaagatcaaacacctgaac 1984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tacaatctactcctgctactgctcacaattatatcaagtataaagatcaaacacctgaac 494
Query: 1985 cacttggatataaatgcatgttgtgcaaaagggatctctcctacgtcccagaagggccaa 2044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cacttggatataaatgcatgttgtgcaaaagggatctctcctacgtcccagaagggccaa 434
Query: 2045 tttcacagccacctactccgcctgcggctgctgtcctgtcatgtggccacacatttcacc 2104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tttcacagccacctactccgcctgcggctgctgtcctgtcatgtggccacacatttcacc 374
Query: 2105 aacattgtttggagaaaatgactcctgatggccaatccaaagaccctccatgcattccct 2164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aacattgtttggagaaaatgactcctgatggccaatccaaagaccctccatgcattccct 314
Query: 2165 gtgctcttggagaatagtga 2184
||||||||||||||||||||
Sbjct: 313 gtgctcttggagaatagtga 294