Miyakogusa Predicted Gene
- Lj3g3v0002100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0002100.1 tr|A9TGW3|A9TGW3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_145447,46.9,4e-19,no description,Heat shock protein
DnaJ, N-terminal; DnaJ,Heat shock protein DnaJ, N-terminal;
DNAJ_2,CUFF.40168.1
(417 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75830 similar to UniRef100_A7QFY4 Cluster: Chromosome... 729 0.0
gnl|LJGI|TC57606 similar to UniRef100_A7QFY4 Cluster: Chromosome... 165 3e-40
gnl|LJGI|BE122643 similar to UniRef100_A7QFY4 Cluster: Chromosom... 161 4e-39
gnl|LJGI|TC78003 similar to UniRef100_A7QFY4 Cluster: Chromosome... 151 4e-36
gnl|LJGI|AV765346 homologue to UniRef100_A7QFY4 Cluster: Chromos... 121 4e-27
gnl|LJGI|TC82103 similar to UniRef100_A7QFY4 Cluster: Chromosome... 70 1e-11
>gnl|LJGI|TC75830 similar to UniRef100_A7QFY4 Cluster: Chromosome chr9 scaffold_90,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_90, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 480
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Plus
Query: 1 atggctgctgctgctgctggggttattggtggttattcattgtcatggatgcaattcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atggctgctgctgctgctggggttattggtggttattcattgtcatggatgcaattcaaa 172
Query: 61 ggcagagaaaggaatcacaacagggttatgatttgttgctcttcttctttgatggattct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ggcagagaaaggaatcacaacagggttatgatttgttgctcttcttctttgatggattct 232
Query: 121 tataagaccttaagagtccaaccaggtgcctcccaaactgaggttaagaaagctttccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tataagaccttaagagtccaaccaggtgcctcccaaactgaggttaagaaagctttccgg 292
Query: 181 caccttgctctgcagtaccatccagacgtgtgccaaggcagcaaatgtggggtgcagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 caccttgctctgcagtaccatccagacgtgtgccaaggcagcaaatgtggggtgcagttt 352
Query: 241 caccacatcaacgaggcttatgatgttgtgatggccaatttgagaggtgaatccaacaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 caccacatcaacgaggcttatgatgttgtgatggccaatttgagaggtgaatccaacaca 412
Query: 301 tcactaatgtatgaggcaggcattgatgaggcaattaagggagtgaatgatcaagatttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tcactaatgtatgaggcaggcattgatgaggcaattaagggagtgaatgatcaagatttg 472
Query: 361 gaggactt 368
||||||||
Sbjct: 473 gaggactt 480
>gnl|LJGI|TC57606 similar to UniRef100_A7QFY4 Cluster: Chromosome chr9 scaffold_90,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_90, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 1039
Score = 165 bits (83), Expect = 3e-40
Identities = 169/195 (86%), Gaps = 2/195 (1%)
Strand = Plus / Plus
Query: 100 tcttcttctttgatggattcttataagacctt-aagagtccaaccaggtgcctcccaaac 158
||||||||| |||||||| ||||||||||||| |||| || |||| |||||||| ||||
Sbjct: 385 tcttcttctgtgatggatccttataagaccttgaagattc-aacctggtgcctctgaaac 443
Query: 159 tgaggttaagaaagctttccggcaccttgctctgcagtaccatccagacgtgtgccaagg 218
|||||| | ||| |||||| |||| |||||| ||||||| |||||||| || ||| |||
Sbjct: 444 tgaggtcaggaaggctttcaggcagcttgctttgcagtatcatccagatgtatgcagagg 503
Query: 219 cagcaaatgtggggtgcagtttcaccacatcaacgaggcttatgatgttgtgatggccaa 278
||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 504 gagcaattgtggggtgcagtttcatctgatcaatgaggcttatgatgttgtgatggccaa 563
Query: 279 tttgagaggtgaatc 293
||||||||| |||||
Sbjct: 564 tttgagaggagaatc 578
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 368 tgtgggaagagtggatggggtgggaaggagcaggaattcgtga 410
||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 659 tgtgggaagagtggatgggttgggaaggagcaggaatccgtga 701
>gnl|LJGI|BE122643 similar to UniRef100_A7QFY4 Cluster: Chromosome chr9 scaffold_90,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_90, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 337
Score = 161 bits (81), Expect = 4e-39
Identities = 164/189 (86%), Gaps = 2/189 (1%)
Strand = Plus / Plus
Query: 100 tcttcttctttgatggattcttataagacctt-aagagtccaaccaggtgcctcccaaac 158
||||||||| |||||||| ||||||||||||| |||| || |||| |||||||| ||||
Sbjct: 70 tcttcttctgtgatggatccttataagaccttgaagattc-aacctggtgcctctgaaac 128
Query: 159 tgaggttaagaaagctttccggcaccttgctctgcagtaccatccagacgtgtgccaagg 218
|||||| | ||| |||||| |||| |||||| ||||||| |||||||| || ||| |||
Sbjct: 129 tgaggtcaggaaggctttcaggcagcttgctttgcagtatcatccagatgtatgcagagg 188
Query: 219 cagcaaatgtggggtgcagtttcaccacatcaacgaggcttatgatgttgtgatggccaa 278
||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 189 gagcaattgtggggtgcagtttcatctgatcaatgaggcttatgatgttgtgatggccaa 248
Query: 279 tttgagagg 287
|||||||||
Sbjct: 249 tttgagagg 257
>gnl|LJGI|TC78003 similar to UniRef100_A7QFY4 Cluster: Chromosome chr9 scaffold_90,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_90, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 542
Score = 151 bits (76), Expect = 4e-36
Identities = 159/184 (86%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 111 gatggattcttataagacctt-aagagtccaaccaggtgcctcccaaactgaggttaaga 169
||||||| ||||||||||||| |||| || |||| |||||||| |||||||||| | ||
Sbjct: 1 gatggatccttataagaccttgaagattc-aacctggtgcctctgaaactgaggtcagga 59
Query: 170 aagctttccggcaccttgctctgcagtaccatccagacgtgtgccaaggcagcaaatgtg 229
| |||||| |||| |||||| ||||||| |||||||| || ||| ||| ||||| ||||
Sbjct: 60 aggctttcaggcagcttgctttgcagtatcatccagatgtatgcagagggagcaattgtg 119
Query: 230 gggtgcagtttcaccacatcaacgaggcttatgatgttgtgatggccaatttgagaggtg 289
||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 120 gggtgcagtttcatctgatcaatgaggcttatgatgttgtgatggccaatttgagaggag 179
Query: 290 aatc 293
||||
Sbjct: 180 aatc 183
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 368 tgtgggaagagtggatggggtgggaaggagcaggaattcgtga 410
||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 264 tgtgggaagagtggatgggttgggaaggagcaggaatccgtga 306
>gnl|LJGI|AV765346 homologue to UniRef100_A7QFY4 Cluster: Chromosome chr9 scaffold_90,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_90, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 267
Score = 121 bits (61), Expect = 4e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 345 gaatgatcaagatttggaggacttgtgggaagagtggatggggtgggaaggagcaggaat 404
||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 267 gaatgatcaagttttggaggacttgtgggaagagtgaatggggtgggaaggaacaggaat 208
Query: 405 tcgtgattactct 417
|||||||||||||
Sbjct: 207 tcgtgattactct 195
>gnl|LJGI|TC82103 similar to UniRef100_A7QFY4 Cluster: Chromosome chr9 scaffold_90,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_90, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 745
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 368 tgtgggaagagtggatggggtgggaaggagcaggaattcgtga 410
||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 522 tgtgggaagagtggatgggttgggaaggagcaggaatccgtga 564
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 193 cagtaccatccagacgtgtgccaaggcagcaaatgtggggtgcagtttcaccacatcaac 252
||||| |||||||| || ||| ||| ||||| ||||||||||||||||| | |||||
Sbjct: 11 cagtatcatccagatgtatgcagagggagcaattgtggggtgcagtttcatctgatcaat 70
Query: 253 gaggcttatgatgt 266
||||||||||||||
Sbjct: 71 gaggcttatgatgt 84