Miyakogusa Predicted Gene
- Lj2g3v3413270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3413270.1 Non Chatacterized Hit- tr|D7U4R2|D7U4R2_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,70.23,0,no
description,Mitochondrial carrier domain; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; SOLCAR,CUFF.40145.1
(996 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO040297 similar to UniRef100_Q0IZR6 Cluster: Os09g0554... 783 0.0
gnl|LJGI|TC68941 similar to UniRef100_A7P8S1 Cluster: Chromosome... 688 0.0
>gnl|LJGI|GO040297 similar to UniRef100_Q0IZR6 Cluster: Os09g0554000 protein; n=1;
Oryza sativa Japonica Group|Rep: Os09g0554000 protein -
Oryza sativa subsp. japonica (Rice), partial (55%)
Length = 859
Score = 783 bits (395), Expect = 0.0
Identities = 420/426 (98%), Gaps = 3/426 (0%)
Strand = Plus / Minus
Query: 395 accgcaattacatcttcttactcagcagttctgttgctcagcttttagctgatgtcaccc 454
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 844 accgcaattacatctc--tactcagcagttctgt-gctcagcttttagctgatgtcaccc 788
Query: 455 tttcacctttcgaagctgttaaaatccgtgttcagatccaccctaatttcgctaagggtt 514
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 787 tttcacctttcgaagctgttaaaatccgtgttcggatccaccctaatttcgctaagggtt 728
Query: 515 tggctgatggctttcctcttgtttacaaaaacgaaggtcttgctggtttctacaggggcc 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tggctgatggctttcctcttgtttacaaaaacgaaggtcttgctggtttctacaggggcc 668
Query: 575 ttattccattgtggagccgcaatcttcctttcaacattgttatgttttcaacatttgagc 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ttattccattgtggagccgcaatcttcctttcaacattgttatgttttcaacatttgagc 608
Query: 635 atacggtggacttaatatatagcaggatcatccaaagaaggaaggaggattgttccacag 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 atacggtggacttaatatatagcaggatcatccaaagaaggaaggaggattgttccacag 548
Query: 695 cacagcaacttggtgtgacatgcttcgcagcctatacagctggtgctgctggcacaataa 754
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 cacagcaacttggtgcgacatgcttcgcagcctatacagctggtgctgctggcacaataa 488
Query: 755 tttccaaccctgctgacaatgttatgaccagtctttataagaaaaaggctgaatctgcaa 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttccaaccctgctgacaatgttatgaccagtctttataagaaaaaggctgaatctgcaa 428
Query: 815 tgcaag 820
||||||
Sbjct: 427 tgcaag 422
Score = 351 bits (177), Expect = 5e-96
Identities = 177/177 (100%)
Strand = Plus / Minus
Query: 820 gctatcaagaacattgggtttgttaatttgttcactagaagtcttcctgtacgtatcgca 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gctatcaagaacattgggtttgttaatttgttcactagaagtcttcctgtacgtatcgca 250
Query: 880 ctcctaggtccagttgttaccttgcagtggtttttctatgacgccataaaagtgctttgt 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctcctaggtccagttgttaccttgcagtggtttttctatgacgccataaaagtgctttgt 190
Query: 940 ggactgcctaccagtggagggcttccgagagacctggaaaaagctaagtcgtagctt 996
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ggactgcctaccagtggagggcttccgagagacctggaaaaagctaagtcgtagctt 133
>gnl|LJGI|TC68941 similar to UniRef100_A7P8S1 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 573
Score = 688 bits (347), Expect = 0.0
Identities = 347/347 (100%)
Strand = Plus / Plus
Query: 650 tatatagcaggatcatccaaagaaggaaggaggattgttccacagcacagcaacttggtg 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatatagcaggatcatccaaagaaggaaggaggattgttccacagcacagcaacttggtg 60
Query: 710 tgacatgcttcgcagcctatacagctggtgctgctggcacaataatttccaaccctgctg 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgacatgcttcgcagcctatacagctggtgctgctggcacaataatttccaaccctgctg 120
Query: 770 acaatgttatgaccagtctttataagaaaaaggctgaatctgcaatgcaagctatcaaga 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaatgttatgaccagtctttataagaaaaaggctgaatctgcaatgcaagctatcaaga 180
Query: 830 acattgggtttgttaatttgttcactagaagtcttcctgtacgtatcgcactcctaggtc 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acattgggtttgttaatttgttcactagaagtcttcctgtacgtatcgcactcctaggtc 240
Query: 890 cagttgttaccttgcagtggtttttctatgacgccataaaagtgctttgtggactgccta 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagttgttaccttgcagtggtttttctatgacgccataaaagtgctttgtggactgccta 300
Query: 950 ccagtggagggcttccgagagacctggaaaaagctaagtcgtagctt 996
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccagtggagggcttccgagagacctggaaaaagctaagtcgtagctt 347