Miyakogusa Predicted Gene
- Lj2g3v3403240.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3403240.2 tr|I1M634|I1M634_SOYBN Glutamate receptor
(Fragment) OS=Glycine max PE=3 SV=1,84.65,0,seg,NULL;
ANF_receptor,Extracellular ligand-binding receptor;
SBP_bac_3,Extracellular solute-binding,CUFF.40144.2
(2115 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69253 similar to UniRef100_A7P8R9 Cluster: Chromosome... 1076 0.0
gnl|LJGI|TC75875 similar to UniRef100_Q93YT1 Cluster: Glutamate ... 517 e-146
gnl|LJGI|TC61089 weakly similar to UniRef100_A7PDB3 Cluster: Chr... 56 9e-07
>gnl|LJGI|TC69253 similar to UniRef100_A7P8R9 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 741
Score = 1076 bits (543), Expect = 0.0
Identities = 549/551 (99%)
Strand = Plus / Plus
Query: 160 gtctgcatgcagcagcagctagtctatcacgaccaccacgggttccggttctggatgaat 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gtctgcatgcagcagcagctagtctatcacgaccaccacgggttccggttctggatgaat 250
Query: 220 ctgctgagcttgtgcctgtgcctgtgcctgtgccttgcattgcacagagcaccaggggaa 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ctgctgagcttgtgcctgtgcctgtgcctgtgccttgcattgcacagagcaccaggggaa 310
Query: 280 ggagcttccagacatgacaacgtcgtcgtcaatgtcggtgccatattcactctgaagact 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggagcttccagacatgacaacgtcgtcgtcaatgtcggtgccatattcactctgaagact 370
Query: 340 ataaacggaaaagtctccaagattgccatcgaagctgcacagaaagatgtcaattccgat 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ataaacggaaaagtctccaagattgccatcgaagctgcacagaaagatgtcaattccgat 430
Query: 400 cctcgcatcttgggtggacgtaaactttccataaccatccatgattctaacttcagtggc 459
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 431 cctcgcatcttgggtggacgtaaactttccataaccatccatgattctaacttcagaggc 490
Query: 460 tttctaggctttattggggccctcaggttcttgatgactgatactgtagctataattggt 519
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 491 tttctaggctttattggggccctcaagttcttgatgactgatactgtagctataattggt 550
Query: 520 ccacaaaattcagtaatggcccatgtgctttcgcatcttgcaaatgagctccaagttcct 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ccacaaaattcagtaatggcccatgtgctttcgcatcttgcaaatgagctccaagttcct 610
Query: 580 ctgctatctttcacggctttggatcccaccctcacacctcttcagtgtccttattttgtc 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctgctatctttcacggctttggatcccaccctcacacctcttcagtgtccttattttgtc 670
Query: 640 caaactgcacccagtgacctgtttcagatgactgcagttgctgacatgataagctatttt 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 caaactgcacccagtgacctgtttcagatgactgcagttgctgacatgataagctatttt 730
Query: 700 ggttggaggca 710
|||||||||||
Sbjct: 731 ggttggaggca 741
>gnl|LJGI|TC75875 similar to UniRef100_Q93YT1 Cluster: Glutamate receptor 3.2
precursor; n=1; Arabidopsis thaliana|Rep: Glutamate
receptor 3.2 precursor - Arabidopsis thaliana (Mouse-ear
cress), partial (16%)
Length = 897
Score = 517 bits (261), Expect = e-146
Identities = 261/261 (100%)
Strand = Plus / Plus
Query: 1849 ggtgacattgctattgtcactagccggacaaagattgtggattttactcaaccatttata 1908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgacattgctattgtcactagccggacaaagattgtggattttactcaaccatttata 60
Query: 1909 gagtcaggtttagttgtggttgctccggtgaaaaagttgaagacaagtgcttgggctttc 1968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagtcaggtttagttgtggttgctccggtgaaaaagttgaagacaagtgcttgggctttc 120
Query: 1969 ttgagaccgtttactccacagatgtggggtgtcactgcactttttctccttcttgttgga 2028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgagaccgtttactccacagatgtggggtgtcactgcactttttctccttcttgttgga 180
Query: 2029 atagtggtgtggattcttgaacacagaacaaatgatgagtttcgggggcctccaaagaaa 2088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atagtggtgtggattcttgaacacagaacaaatgatgagtttcgggggcctccaaagaaa 240
Query: 2089 cagatggttacgattctttgg 2109
|||||||||||||||||||||
Sbjct: 241 cagatggttacgattctttgg 261
>gnl|LJGI|TC61089 weakly similar to UniRef100_A7PDB3 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (65%)
Length = 1256
Score = 56.0 bits (28), Expect = 9e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 227 gcttgtgcctgtgcctgtgcctgtgcct 254
||||||||||||||||||||||||||||
Sbjct: 666 gcttgtgcctgtgcctgtgcctgtgcct 639