Miyakogusa Predicted Gene
- Lj2g3v3403240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3403240.1 tr|I1M634|I1M634_SOYBN Glutamate receptor
(Fragment) OS=Glycine max PE=3 SV=1,84.63,0,GLUTAMATE RECEPTOR 3
PLANT,NULL; IONOTROPIC GLUTAMATE RECEPTOR,NULL; Eukaryotic homologues
of bacter,CUFF.40144.1
(1962 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69253 similar to UniRef100_A7P8R9 Cluster: Chromosome... 1065 0.0
gnl|LJGI|TC75875 similar to UniRef100_Q93YT1 Cluster: Glutamate ... 515 e-145
gnl|LJGI|TC61089 weakly similar to UniRef100_A7PDB3 Cluster: Chr... 56 9e-07
>gnl|LJGI|TC69253 similar to UniRef100_A7P8R9 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 741
Score = 1065 bits (537), Expect = 0.0
Identities = 543/545 (99%)
Strand = Plus / Plus
Query: 1 atgcagcagcagctagtctatcacgaccaccacgggttccggttctggatgaatctgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atgcagcagcagctagtctatcacgaccaccacgggttccggttctggatgaatctgctg 256
Query: 61 agcttgtgcctgtgcctgtgcctgtgccttgcattgcacagagcaccaggggaaggagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agcttgtgcctgtgcctgtgcctgtgccttgcattgcacagagcaccaggggaaggagct 316
Query: 121 tccagacatgacaacgtcgtcgtcaatgtcggtgccatattcactctgaagactataaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tccagacatgacaacgtcgtcgtcaatgtcggtgccatattcactctgaagactataaac 376
Query: 181 ggaaaagtctccaagattgccatcgaagctgcacagaaagatgtcaattccgatcctcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggaaaagtctccaagattgccatcgaagctgcacagaaagatgtcaattccgatcctcgc 436
Query: 241 atcttgggtggacgtaaactttccataaccatccatgattctaacttcagtggctttcta 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 437 atcttgggtggacgtaaactttccataaccatccatgattctaacttcagaggctttcta 496
Query: 301 ggctttattggggccctcaggttcttgatgactgatactgtagctataattggtccacaa 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggctttattggggccctcaagttcttgatgactgatactgtagctataattggtccacaa 556
Query: 361 aattcagtaatggcccatgtgctttcgcatcttgcaaatgagctccaagttcctctgcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aattcagtaatggcccatgtgctttcgcatcttgcaaatgagctccaagttcctctgcta 616
Query: 421 tctttcacggctttggatcccaccctcacacctcttcagtgtccttattttgtccaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tctttcacggctttggatcccaccctcacacctcttcagtgtccttattttgtccaaact 676
Query: 481 gcacccagtgacctgtttcagatgactgcagttgctgacatgataagctattttggttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gcacccagtgacctgtttcagatgactgcagttgctgacatgataagctattttggttgg 736
Query: 541 aggca 545
|||||
Sbjct: 737 aggca 741
>gnl|LJGI|TC75875 similar to UniRef100_Q93YT1 Cluster: Glutamate receptor 3.2
precursor; n=1; Arabidopsis thaliana|Rep: Glutamate
receptor 3.2 precursor - Arabidopsis thaliana (Mouse-ear
cress), partial (16%)
Length = 897
Score = 515 bits (260), Expect = e-145
Identities = 260/260 (100%)
Strand = Plus / Plus
Query: 1684 ggtgacattgctattgtcactagccggacaaagattgtggattttactcaaccatttata 1743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgacattgctattgtcactagccggacaaagattgtggattttactcaaccatttata 60
Query: 1744 gagtcaggtttagttgtggttgctccggtgaaaaagttgaagacaagtgcttgggctttc 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagtcaggtttagttgtggttgctccggtgaaaaagttgaagacaagtgcttgggctttc 120
Query: 1804 ttgagaccgtttactccacagatgtggggtgtcactgcactttttctccttcttgttgga 1863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgagaccgtttactccacagatgtggggtgtcactgcactttttctccttcttgttgga 180
Query: 1864 atagtggtgtggattcttgaacacagaacaaatgatgagtttcgggggcctccaaagaaa 1923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atagtggtgtggattcttgaacacagaacaaatgatgagtttcgggggcctccaaagaaa 240
Query: 1924 cagatggttacgattctttg 1943
||||||||||||||||||||
Sbjct: 241 cagatggttacgattctttg 260
>gnl|LJGI|TC61089 weakly similar to UniRef100_A7PDB3 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (65%)
Length = 1256
Score = 56.0 bits (28), Expect = 9e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 62 gcttgtgcctgtgcctgtgcctgtgcct 89
||||||||||||||||||||||||||||
Sbjct: 666 gcttgtgcctgtgcctgtgcctgtgcct 639