Miyakogusa Predicted Gene
- Lj2g3v3403230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3403230.1 Non Chatacterized Hit- tr|Q56WL2|Q56WL2_ARATH
Putative uncharacterized protein At1g20760
OS=Arabidop,68.85,5e-18,seg,NULL; EF-hand,NULL; no
description,EF-hand-like domain; efhand_3,NULL;
INTERSECTIN-RELATED,NULL;,CUFF.40150.1
(1710 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AU089467 weakly similar to UniRef100_A0TCC0 Cluster: Ph... 848 0.0
gnl|LJGI|TC77647 similar to UniRef100_A7P8R5 Cluster: Chromosome... 202 5e-51
>gnl|LJGI|AU089467 weakly similar to UniRef100_A0TCC0 Cluster: Phospholipid/glycerol
acyltransferase; n=1; Burkholderia ambifaria MC40-6|Rep:
Phospholipid/glycerol acyltransferase - Burkholderia
ambifaria MC40-6, partial (8%)
Length = 457
Score = 848 bits (428), Expect = 0.0
Identities = 442/449 (98%)
Strand = Plus / Plus
Query: 289 gccatacctgttggtgtagttcgccctgtgaccccaagttatggctccaccggcaagacg 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gccatacctgttggtgtagttcgccctgtgaccccaagttatggctccaccggcaagacg 68
Query: 349 ggcggagctccagatggaatgccctctcaaattgcacctagagggagtagtcccggatca 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ggcggagctccagatggaatgccctctcaaattgcacctagagggagtagtcccggatca 128
Query: 409 ataccagaggggtttgggcttgcaacgtctggatcaaatgttgcactggcacctagacag 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 129 ataccagaggggtttgggcttgcaacgtctggatcaaatgttgcactggcacctanacag 188
Query: 469 tatcctgcctcaggcacaaagccatcagatcaaggggttaaggattctaaattaaaggat 528
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 189 tatcctgcctcaggcacaaagccatcanatcaaggggttaaggattctaaattaaaggat 248
Query: 529 acttctgtgaatgagatttctcctgattcattgtttggaggggatatgttctcggctagc 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 acttctgtgaatgagatttctcctgattcattgtttggaggggatatgttctcggctagc 308
Query: 589 tcatttaagccgaagcaagattcttctctgcagggactttcttctggtagctctccgctt 648
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 309 tcatttaagccgaagcaagattcttctctgcagggactttcttctggtanctctccgctt 368
Query: 649 tcatcagctattgttcctatatctggagggagccagaactctatcaggagtagtacctct 708
|||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||
Sbjct: 369 tcatcanctattgttcctatatctggagggagccanaactctatcangagtantacctct 428
Query: 709 gattctttacagagctcacttgcgactca 737
|||||||||||||||||||||||||||||
Sbjct: 429 gattctttacagagctcacttgcgactca 457
>gnl|LJGI|TC77647 similar to UniRef100_A7P8R5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 495
Score = 202 bits (102), Expect = 5e-51
Identities = 108/110 (98%)
Strand = Plus / Plus
Query: 1 atggtcaaagcagcattatatggcccagctgcatctaagattcctgaacctcaaattaat 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 386 atggtcaaagcagcattatatggcccagctgcatctaagattcctgcacctcaaattaat 445
Query: 61 ttcactgccactgcaactgccactgctgcacccccattaacttcccccgc 110
|||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 446 ttcactgccactgccactgccactgctgcacccccattaacttcccccgc 495