Miyakogusa Predicted Gene

Lj2g3v3393220.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3393220.2 Non Chatacterized Hit- tr|K4DDI9|K4DDI9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,48.15,0.48,
,CUFF.40143.2
         (223 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80210 weakly similar to UniRef100_A7P5L9 Cluster: Chr...   442   e-124
gnl|LJGI|TC80251                                                       72   2e-12

>gnl|LJGI|TC80210 weakly similar to UniRef100_A7P5L9 Cluster: Chromosome chr4
           scaffold_6, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 959

 Score =  442 bits (223), Expect = e-124
 Identities = 223/223 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttggaggttactttacaagcacaagaagcagctcttggagttaactttgatgaaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atgttggaggttactttacaagcacaagaagcagctcttggagttaactttgatgaaata 430

                                                                       
Query: 61  tacacaagtatctcatatccatgtcattggaaatccataatggaaaacatgattcagatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tacacaagtatctcatatccatgtcattggaaatccataatggaaaacatgattcagatg 490

                                                                       
Query: 121 tttggaagcaaacactgctctttaagcaaacactactcctcacatgttactttaatgttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tttggaagcaaacactgctctttaagcaaacactactcctcacatgttactttaatgttg 550

                                                      
Query: 181 tatttgcaggtgatggaatttctcaagtcccttgaggtatgac 223
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tatttgcaggtgatggaatttctcaagtcccttgaggtatgac 593


>gnl|LJGI|TC80251 
          Length = 1316

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 188 aggtgatggaatttctcaagtcccttgaggtatgac 223
           ||||||||||||||||||||||||||||||||||||
Sbjct: 851 aggtgatggaatttctcaagtcccttgaggtatgac 886