Miyakogusa Predicted Gene

Lj2g3v3393200.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3393200.1 Non Chatacterized Hit- tr|G7J657|G7J657_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,45.26,0.000000003,seg,NULL,CUFF.40135.1
         (387 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74199 similar to UniRef100_A7NSJ9 Cluster: Chromosome...   763   0.0  
gnl|LJGI|TC57730 similar to UniRef100_A9P6A4 Cluster: Ethylene-r...    56   2e-07

>gnl|LJGI|TC74199 similar to UniRef100_A7NSJ9 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (88%)
          Length = 1219

 Score =  763 bits (385), Expect = 0.0
 Identities = 385/385 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatttggttaaagcttcaagcctgaaaccatggcgaattccttcaccgccactaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  atggatttggttaaagcttcaagcctgaaaccatggcgaattccttcaccgccactaatt 123

                                                                       
Query: 61  aacatcaccacttcgactgctaccaccttctatttctctcctcgctcttcaaaaaatttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aacatcaccacttcgactgctaccaccttctatttctctcctcgctcttcaaaaaatttc 183

                                                                       
Query: 121 tcgtttccattttcaacctttcaagttcaacacactcagttaaagcccctaattctccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tcgtttccattttcaacctttcaagttcaacacactcagttaaagcccctaattctccat 243

                                                                       
Query: 181 ggcaagaagagaaactcctctgattccgaaccagttctcgaacccaccatcgtccaagaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggcaagaagagaaactcctctgattccgaaccagttctcgaacccaccatcgtccaagaa 303

                                                                       
Query: 241 gtatcaatggatgaagaagaagacgatgaattcgattacgaggaaccactgaacgacgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtatcaatggatgaagaagaagacgatgaattcgattacgaggaaccactgaacgacgag 363

                                                                       
Query: 301 gacgaggacggtgacgagtactatgacgacgacgaacaagaagaagaagagtttgaggat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gacgaggacggtgacgagtactatgacgacgacgaacaagaagaagaagagtttgaggat 423

                                    
Query: 361 gaagatgaggatagtgtgccctatg 385
           |||||||||||||||||||||||||
Sbjct: 424 gaagatgaggatagtgtgccctatg 448


>gnl|LJGI|TC57730 similar to UniRef100_A9P6A4 Cluster: Ethylene-responsive
           transcription factor 1A; n=1; Medicago truncatula|Rep:
           Ethylene-responsive transcription factor 1A - Medicago
           truncatula (Barrel medic), partial (69%)
          Length = 1311

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 323 atgacgacgacgaacaagaagaagaaga 350
           ||||||||||||||||||||||||||||
Sbjct: 796 atgacgacgacgaacaagaagaagaaga 769