Miyakogusa Predicted Gene

Lj2g3v3362940.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3362940.1 Non Chatacterized Hit- tr|A5AKP5|A5AKP5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,28.57,3.6,seg,NULL,CUFF.40124.1
         (246 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC595045 weakly similar to UniRef100_A7NSQ1 Cluster: Ch...   141   2e-33

>gnl|LJGI|DC595045 weakly similar to UniRef100_A7NSQ1 Cluster: Chromosome chr18
           scaffold_1, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (14%)
          Length = 446

 Score =  141 bits (71), Expect = 2e-33
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                       
Query: 60  aaccccacggcgccgccgccatacccaccaccgccgccgctaccaagtcagtgatcagaa 119
           ||||||||||||||||||||| | |||||||| ||||||| |||| ||  | ||||||||
Sbjct: 87  aaccccacggcgccgccgccacaaccaccaccaccgccgccaccaggtgggggatcagaa 146

                                                              
Query: 120 caatcctcggctacctcaaagttggtcgcatccggaaagccacatccattc 170
           |||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 147 caatcctcggctacctcaaagttggtcgcatccaaaaagccacatccattc 197



 Score =  103 bits (52), Expect = 5e-22
 Identities = 68/71 (95%), Gaps = 3/71 (4%)
 Strand = Plus / Plus

                                                                       
Query: 168 ttcccttactctctctacgccctcttcttccg--tctgctcctcccacc-cttcatcgtt 224
           ||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||
Sbjct: 218 ttcccttactctctctacgccctcttcttccgtctctgctcctcccaccgcttcatcgtt 277

                      
Query: 225 gaggcccgcaa 235
           |||||||||||
Sbjct: 278 gaggcccgcaa 288