Miyakogusa Predicted Gene
- Lj2g3v3341860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3341860.1 Non Chatacterized Hit- tr|H3D0I9|H3D0I9_TETNG
Uncharacterized protein (Fragment) OS=Tetraodon
nigrov,44.44,5e-19,CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE,NULL;
CYTIDYLYLTRANSFERASE,NULL; coiled-coil,NULL; seg,NULL,CUFF.40136.1
(615 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59624 similar to UniRef100_Q42619 Cluster: CTP:phosph... 735 0.0
gnl|LJGI|AU088898 similar to UniRef100_Q8L4J8 Cluster: CTP:phosp... 618 e-177
gnl|LJGI|TC65707 similar to UniRef100_A7NSH4 Cluster: Naked cuti... 92 5e-18
gnl|LJGI|TC68624 homologue to UniRef100_P93470 Cluster: Cholinep... 86 3e-16
>gnl|LJGI|TC59624 similar to UniRef100_Q42619 Cluster: CTP:phosphocholine
cytidylyltransferase; n=1; Brassica napus|Rep:
CTP:phosphocholine cytidylyltransferase - Brassica napus
(Rape), partial (71%)
Length = 807
Score = 735 bits (371), Expect = 0.0
Identities = 371/371 (100%)
Strand = Plus / Plus
Query: 7 gttaaagctgttgggaagtttaaggaaacacaaaggactgatggaatctctacatcagat 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gttaaagctgttgggaagtttaaggaaacacaaaggactgatggaatctctacatcagat 496
Query: 67 attataatgagaattgttaaagattacaaccagtatgtgttgcgcaacttggatcgcggc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 attataatgagaattgttaaagattacaaccagtatgtgttgcgcaacttggatcgcggc 556
Query: 127 tactccagaaaagagcttggcgtcagctatgtcaaggaaaagcgactgagggtgaataga 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tactccagaaaagagcttggcgtcagctatgtcaaggaaaagcgactgagggtgaataga 616
Query: 187 aggttgaaaacattacaagagaaagttaaggagcaacaagaaaaggttggtgaaaagatc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aggttgaaaacattacaagagaaagttaaggagcaacaagaaaaggttggtgaaaagatc 676
Query: 247 caaattgttgccaagactgctggtatgcaccggaatgaatgggttgaaaatgctgataga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 caaattgttgccaagactgctggtatgcaccggaatgaatgggttgaaaatgctgataga 736
Query: 307 tgggttgctggatttctggaaatgtttgaagaaggttgccataagatgggaacgtcaatt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgggttgctggatttctggaaatgtttgaagaaggttgccataagatgggaacgtcaatt 796
Query: 367 atagatcgaat 377
|||||||||||
Sbjct: 797 atagatcgaat 807
>gnl|LJGI|AU088898 similar to UniRef100_Q8L4J8 Cluster: CTP:phosphorylcholine
cytidylyltransferase; n=1; Arabidopsis thaliana|Rep:
CTP:phosphorylcholine cytidylyltransferase - Arabidopsis
thaliana (Mouse-ear cress), partial (59%)
Length = 643
Score = 618 bits (312), Expect = e-177
Identities = 345/357 (96%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 7 gttaaagctgttgggaagtttaaggaaacacaaaggactgatggaatctctacatcagat 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gttaaagctgttgggaagtttaaggaaacacaaaggactgatggaatctctacatcagat 273
Query: 67 attataatgagaattgttaaagattacaaccagtatgtgttgcgcaacttggatcgcggc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 attataatgagaattgttaaagattacaaccagtatgtgttgcgcaacttggatcgcggc 333
Query: 127 tactccagaaaagagcttggcgtcagctatgtcaaggaaaagcgactgagggtgaataga 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 334 tactccagaaaagagcttggcgtcagctatgtcaaggaaaagcgactgagggtgaatana 393
Query: 187 aggttgaaaacattacaagagaaagttaaggagcaacaagaaaaggttggtgaaaagatc 246
||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 394 aggttgaaaacattacatgagaaagttaaggagc-acaagaaaaggtnggtgaaaagatc 452
Query: 247 caaattgttgccaagactgctggtatgcaccggaatgaatgggttgaaaatgctgataga 306
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 453 caaattgttgccaanactgctggtntgcaccggaatgaatgggttgaaaatgctgataaa 512
Query: 307 tgggttgctggatttctggaaatgtttgaagaaggttgccataagatgggaacgtca 363
|||||||||||| ||||||||||||||||| ||||||||||||| | |||||| |||
Sbjct: 513 tgggttgctggaattctggaaatgtttgaaaaaggttgccataanangggaacntca 569
>gnl|LJGI|TC65707 similar to UniRef100_A7NSH4 Cluster: Naked cuticle 2 homolog; n=2;
Mus musculus|Rep: Naked cuticle 2 homolog - Mus musculus
(Mouse), partial (4%)
Length = 667
Score = 91.7 bits (46), Expect = 5e-18
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 570 gcttcatgcccagaataatgggaaagatgacaacaaaaagtagtta 615
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 gcttcatgcccagaataatgggaaagatgacaacaaaaagtagtta 97
>gnl|LJGI|TC68624 homologue to UniRef100_P93470 Cluster: Cholinephosphate
cytidylyltransferase; n=1; Pisum sativum|Rep:
Cholinephosphate cytidylyltransferase - Pisum sativum
(Garden pea), partial (97%)
Length = 1091
Score = 85.7 bits (43), Expect = 3e-16
Identities = 124/151 (82%)
Strand = Plus / Plus
Query: 14 ctgttgggaagtttaaggaaacacaaaggactgatggaatctctacatcagatattataa 73
||||||| || ||||||||||| | ||||||| ||||| ||||| || ||||| ||||
Sbjct: 454 ctgttggaaaatttaaggaaaccaagcggactgaaggaatttctacttctgatatcataa 513
Query: 74 tgagaattgttaaagattacaaccagtatgtgttgcgcaacttggatcgcggctactcca 133
|||||||| | |||||||| ||||||||||| |||| || ||||| || || || || |
Sbjct: 514 tgagaattatcaaagattataaccagtatgtaatgcgtaatttggaccgtggttattcaa 573
Query: 134 gaaaagagcttggcgtcagctatgtcaagga 164
|||| || || || |||||||||||||||||
Sbjct: 574 gaaaggatctaggtgtcagctatgtcaagga 604
Score = 73.8 bits (37), Expect = 1e-12
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 264 tgctggtatgcaccggaatgaatgggttgaaaatgctgatagatgggttgctggatttct 323
|||||| ||| |||| | ||||||||| |||||||| || | | |||||||||||||||
Sbjct: 704 tgctggaatgaaccgtactgaatgggtagaaaatgcggaccgcttggttgctggatttct 763
Query: 324 ggaaatgtttgaagaaggttgccataagatgggaacgtcaattatagatcgaattca 380
|| |||||||||||||| ||||| || |||||||| |||||| ||| |||||||
Sbjct: 764 tgagatgtttgaagaaggctgccacaaaatgggaacagcaattagagacagaattca 820