Miyakogusa Predicted Gene

Lj2g3v3340820.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3340820.2 tr|D7MTV5|D7MTV5_ARALL Zinc finger family protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_,40.09,7e-19,ZINC
FINGER (C3HC4-TYPE RING FINGER) PROTEIN-LIKE (OS01G0610700
PROTEIN),NULL; MEMBRANE ASSOCIATED R,CUFF.40132.2
         (879 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81482 homologue to UniRef100_A7PJQ4 Cluster: Chromoso...    92   7e-18

>gnl|LJGI|TC81482 homologue to UniRef100_A7PJQ4 Cluster: Chromosome chr12 scaffold_18,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_18, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (15%)
          Length = 1429

 Score = 91.7 bits (46), Expect = 7e-18
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                          
Query: 834  aggatgtccgaaaccttccagtaacgctcttgaaaatttctaatcc 879
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 aggatgtccgaaaccttccagtaacgctcttgaaaatttctaatcc 1163