Miyakogusa Predicted Gene
- Lj2g3v3339750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3339750.1 Non Chatacterized Hit- tr|I1JJU7|I1JJU7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,94.77,0,seg,NULL;
TRANSMEMBRANE 9 SUPERFAMILY PROTEIN,NULL; TRANSMEMBRANE 9 SUPERFAMILY
PROTEIN,Nonaspanin (,NODE_77609_length_923_cov_48.072590.path1.1
(519 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024943 homologue to UniRef100_A7Q2V0 Cluster: Chromos... 1021 0.0
gnl|LJGI|TC73354 homologue to UniRef100_A7Q2V0 Cluster: Chromoso... 624 e-178
gnl|LJGI|GO023858 similar to UniRef100_A7Q2V0 Cluster: Chromosom... 289 9e-78
gnl|LJGI|TC60944 homologue to UniRef100_A7QS13 Cluster: Chromoso... 66 2e-10
>gnl|LJGI|GO024943 homologue to UniRef100_A7Q2V0 Cluster: Chromosome chr12
scaffold_47, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (27%)
Length = 753
Score = 1021 bits (515), Expect = 0.0
Identities = 518/519 (99%)
Strand = Plus / Plus
Query: 1 atggggacaaaagctccacaaattgaatttcctgtgcgaactaatcagattccaagggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 atggggacaaaagctccacaaattgaatttcctgtgcgaactaatcagattccaagggaa 92
Query: 61 attccaacacgtaaatacccatcatggcttcttgttcttggtgctggaactcttccgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 attccaacacgtaaatacccatcatggcttcttgttcttggtgctggaactcttccgttt 152
Query: 121 ggaacccttttcattgagcttttctttatcctttccagtatctggcttgggaggttctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ggaacccttttcattgagcttttctttatcctttccagtatctggcttgggaggttctat 212
Query: 181 tatgtctttggcttcttgtcgattgttcttctattgctgattattgtttgtgctgaagtg 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 213 tatgtctttggcttcttgtcgattgttcttctattactgattattgtttgtgctgaagtg 272
Query: 241 tcagtggtcctcacatatatgcatctttgtgtggaagattggcggtggtggtggaaggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tcagtggtcctcacatatatgcatctttgtgtggaagattggcggtggtggtggaaggca 332
Query: 301 ttctttgcatcaggctccgttgctctttatgtcttcttatactccattaactacttggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttctttgcatcaggctccgttgctctttatgtcttcttatactccattaactacttggtt 392
Query: 361 ttcgacctgcagagtttgagtggacctatctctgctatactttatcttggctattcgctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ttcgacctgcagagtttgagtggacctatctctgctatactttatcttggctattcgctg 452
Query: 421 ctcatggcaattgcaatcatgttgtcaaccgggaccattggcttccttatgtcattctac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ctcatggcaattgcaatcatgttgtcaaccgggaccattggcttccttatgtcattctac 512
Query: 481 tttgtgcattatttgttctcatcagtgaagatagattga 519
|||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tttgtgcattatttgttctcatcagtgaagatagattga 551
>gnl|LJGI|TC73354 homologue to UniRef100_A7Q2V0 Cluster: Chromosome chr12
scaffold_47, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (36%)
Length = 1060
Score = 624 bits (315), Expect = e-178
Identities = 468/519 (90%)
Strand = Plus / Plus
Query: 1 atggggacaaaagctccacaaattgaatttcctgtgcgaactaatcagattccaagggaa 60
||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct: 216 atggggacaaaagctgagcccattgaatttcctgtgcggactaatcagattccaagggaa 275
Query: 61 attccaacacgtaaatacccatcatggcttcttgttcttggtgctggaactcttccgttt 120
||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 276 attcctgcacggaaatatccatcatggcttcttgttcttggtgctggaactcttccattt 335
Query: 121 ggaacccttttcattgagcttttctttatcctttccagtatctggcttgggaggttctat 180
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggaaccctcttcattgaacttttctttatcctttccagtatctggcttgggaggttctat 395
Query: 181 tatgtctttggcttcttgtcgattgttcttctattgctgattattgtttgtgctgaagtg 240
||||| ||||| ||| ||| | | ||||||||||||||| |||| || |||||||||||
Sbjct: 396 tatgtgtttggtttcctgttggtggttcttctattgctggttatcgtctgtgctgaagtt 455
Query: 241 tcagtggtcctcacatatatgcatctttgtgtggaagattggcggtggtggtggaaggca 300
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 456 tcagtggttctcacatatatgcatctctgtgtggaagattggcggtggtggtggaaggcg 515
Query: 301 ttctttgcatcaggctccgttgctctttatgtcttcttatactccattaactacttggtt 360
|||||||| ||||| || ||||| || ||||| ||||| |||||| | ||||||||||||
Sbjct: 516 ttctttgcttcaggttctgttgcactatatgttttcttgtactccgtcaactacttggtt 575
Query: 361 ttcgacctgcagagtttgagtggacctatctctgctatactttatcttggctattcgctg 420
|| |||||||||||||||||||||||| |||| ||| | ||||| ||||||||||| |||
Sbjct: 576 tttgacctgcagagtttgagtggacctgtctccgctgtcctttaccttggctattcactg 635
Query: 421 ctcatggcaattgcaatcatgttgtcaaccgggaccattggcttccttatgtcattctac 480
|| |||||| |||| ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 636 ctaatggcagttgctatcatgttgtcgaccgggaccattggcttcctcatgtcattctac 695
Query: 481 tttgtgcattatttgttctcatcagtgaagatagattga 519
|||||||| || |||||||| || |||||||||||||||
Sbjct: 696 tttgtgcactacttgttctcttctgtgaagatagattga 734
>gnl|LJGI|GO023858 similar to UniRef100_A7Q2V0 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 761
Score = 289 bits (146), Expect = 9e-78
Identities = 222/246 (90%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 1 atggggacaaaagctccacaaattgaatttcctgtgcgaactaatcagattccaagggaa 60
||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct: 517 atggggacaaaagctgagcccattgaatttcctgtgcggactaatcagattccaagggaa 576
Query: 61 attccaacacgtaaatacccatcatggcttcttgttcttggtgctggaactcttccgttt 120
||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 577 attcctgcacggaaatatccatcatggcttcttgttcttggtgctggaactcttccattt 636
Query: 121 ggaacccttttcattgagcttttctttatcctttccagtatctggcttgggaggttctat 180
|||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 637 ggaaccctcttcattgaacttttctttatcctttccagtatctggcttggga-gttctat 695
Query: 181 tatgtctttggcttcttgtcgattgttcttctattgctgattattgtttgtgctgaagtg 240
||||| ||||| ||| ||| | | ||||||||||||||| |||| || |||||||||||
Sbjct: 696 tatgtgtttggtttcctgttggtggttcttctattgctggttatcgtctgtgctgaagtt 755
Query: 241 tcagtg 246
||||||
Sbjct: 756 tcagtg 761
>gnl|LJGI|TC60944 homologue to UniRef100_A7QS13 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (27%)
Length = 785
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 76 tacccatcatggcttcttgttcttggtgctggaactcttccgtttggaacccttttcatt 135
||||| ||||||||| | ||||| |||||||| || ||||| ||||| ||||||||||||
Sbjct: 94 tacccttcatggcttttggttctaggtgctggcacccttccatttggtacccttttcatt 153
Query: 136 gagct 140
|||||
Sbjct: 154 gagct 158