Miyakogusa Predicted Gene
- Lj2g3v3339680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3339680.1 Non Chatacterized Hit- tr|I1M660|I1M660_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49545
PE,76.51,0,ZF_RING_2,Zinc finger, RING-type; YDG,SRA-YDG;
YDG_SRA,SRA-YDG; zf-C3HC4_2,NULL; PHD zinc finger,Zin,CUFF.40113.1
(2043 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS333782 similar to UniRef100_A7QT83 Cluster: Chromosom... 1185 0.0
gnl|LJGI|BP036228 similar to UniRef100_A9S470 Cluster: Predicted... 1150 0.0
gnl|LJGI|TC69733 similar to UniRef100_A7QT83 Cluster: Chromosome... 938 0.0
gnl|LJGI|TC59353 similar to UniRef100_A7QT83 Cluster: Chromosome... 72 2e-11
>gnl|LJGI|FS333782 similar to UniRef100_A7QT83 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 657
Score = 1185 bits (598), Expect = 0.0
Identities = 621/630 (98%), Gaps = 9/630 (1%)
Strand = Plus / Plus
Query: 1 atggctcaccaccttccatgcgacgccgacggcacatgcatgctctgcaaactcaaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 atggctcaccaccttccatgcgacgccgacggcacatgcatgctctgcaaactcaaacct 96
Query: 61 cctccttccgaaactctgcagtgccacacctgcattaccccgtggcatcttccctgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 cctccttccgaaactctgcagtgccacacctgcattaccccgtggcatcttccctgcctc 156
Query: 121 ccaacccctcccgcctcttttgtcaactgggactgccctgactgctcctcctccatctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ccaacccctcccgcctcttttgtcaactgggactgccctgactgctcctcctccatctcc 216
Query: 181 gatttccatgctcccgctcctgctccctccgccggcgccgatctcgtctccgccatccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gatttccatgctcccgctcctgctccctccgccggcgccgatctcgtctccgccatccgc 276
Query: 241 gccatcgactccgatgcctccctcactgaccaacagaaggccaagaagaaacaggaactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gccatcgactccgatgcctccctcactgaccaacagaaggccaagaagaaacaggaactc 336
Query: 301 gtcggcggcccgtcatcaggtgaaaaaccccccgccgccggtggaatcctcgacatcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 337 gtcggcggcccgtcatcaggtgaaaaaccccccgccgccggtggaatcc---------tc 387
Query: 361 gacggcagcatcaattgctccttctgcatgcagttaccagatagacccgtcacgactcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gacggcagcatcaattgctccttctgcatgcagttaccagatagacccgtcacgactcct 447
Query: 421 tgcggccacaatttctgcttgaaatgctttgagaaatggattggtcaagggaaacggaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tgcggccacaatttctgcttgaaatgctttgagaaatggattggtcaagggaaacggaca 507
Query: 481 tgcgctaactgccggcgagatattccggcgaagatagcttcacagccgcgtatcaactct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgcgctaactgccggcgagatattccggcgaagatagcttcacagccgcgtatcaactct 567
Query: 541 cagttagccattgcgattcggttggcgaagcttgcgaaatcggaagggaaggtgtctggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cagttagccattgcgattcggttggcgaagcttgcgaaatcggaagggaaggtgtctggt 627
Query: 601 gagccgaagatttaccattttatgaggaac 630
||||||||||||||||||||||||||||||
Sbjct: 628 gagccgaagatttaccattttatgaggaac 657
>gnl|LJGI|BP036228 similar to UniRef100_A9S470 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(15%)
Length = 626
Score = 1150 bits (580), Expect = 0.0
Identities = 580/580 (100%)
Strand = Plus / Plus
Query: 1 atggctcaccaccttccatgcgacgccgacggcacatgcatgctctgcaaactcaaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atggctcaccaccttccatgcgacgccgacggcacatgcatgctctgcaaactcaaacct 106
Query: 61 cctccttccgaaactctgcagtgccacacctgcattaccccgtggcatcttccctgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 cctccttccgaaactctgcagtgccacacctgcattaccccgtggcatcttccctgcctc 166
Query: 121 ccaacccctcccgcctcttttgtcaactgggactgccctgactgctcctcctccatctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ccaacccctcccgcctcttttgtcaactgggactgccctgactgctcctcctccatctcc 226
Query: 181 gatttccatgctcccgctcctgctccctccgccggcgccgatctcgtctccgccatccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gatttccatgctcccgctcctgctccctccgccggcgccgatctcgtctccgccatccgc 286
Query: 241 gccatcgactccgatgcctccctcactgaccaacagaaggccaagaagaaacaggaactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gccatcgactccgatgcctccctcactgaccaacagaaggccaagaagaaacaggaactc 346
Query: 301 gtcggcggcccgtcatcaggtgaaaaaccccccgccgccggtggaatcctcgacatcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gtcggcggcccgtcatcaggtgaaaaaccccccgccgccggtggaatcctcgacatcttc 406
Query: 361 gacggcagcatcaattgctccttctgcatgcagttaccagatagacccgtcacgactcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gacggcagcatcaattgctccttctgcatgcagttaccagatagacccgtcacgactcct 466
Query: 421 tgcggccacaatttctgcttgaaatgctttgagaaatggattggtcaagggaaacggaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tgcggccacaatttctgcttgaaatgctttgagaaatggattggtcaagggaaacggaca 526
Query: 481 tgcgctaactgccggcgagatattccggcgaagatagcttcacagccgcgtatcaactct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tgcgctaactgccggcgagatattccggcgaagatagcttcacagccgcgtatcaactct 586
Query: 541 cagttagccattgcgattcggttggcgaagcttgcgaaat 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cagttagccattgcgattcggttggcgaagcttgcgaaat 626
>gnl|LJGI|TC69733 similar to UniRef100_A7QT83 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 716
Score = 938 bits (473), Expect = 0.0
Identities = 482/485 (99%)
Strand = Plus / Plus
Query: 1559 gcctggagggtgccttttctggcaaaagtttcatcaggaagagggcatgtgaaggtggac 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctggagggtgccttttctggcaaaagtttcatcaggaagagggcatgtgaaggtggac 60
Query: 1619 gctctttacgagctcagaagaacgttatgaaatgcccatcatgttcaaatgacatagctg 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctctttacgagctcagaagaacgttatgaaatgcccatcatgttcaaatgacatagctg 120
Query: 1679 attttcttcagaatccacaggttaacagagaaatgatgggtgttgtagaatcactccaga 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attttcttcagaatccacaggttaacagagaaatgatgggtgttgtagaatcactccaga 180
Query: 1739 gccagattgcacaagacgagaattctgaacaggtggagaactcagaagagttgagtgaca 1798
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 gccagattgcacaagacgagaattttgaacaggtggagaactcagaagagttgagtgaca 240
Query: 1799 aaagtgatgaaattgtcaagaatgtgcctgatgaggtagaagtttcaaaaccctgtgatg 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagtgatgaaattgtcaagaatgtgcctgatgaggtagaagtttcaaaaccctgtgatg 300
Query: 1859 attcaactgaaagtgatgaaaatgtgaagaatgtgactgatgaggtagaagttttaaaat 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attcaactgaaagtgatgaaaatgtgaagaatgtgactgatgaggtagaagttttaaaat 360
Query: 1919 cctgtgattcaactgaaaaagtattggaggagattaatgacaatgatctgaatcggccgc 1978
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 361 cctgtgattcaactgaaaaagtattggaggagattaatgacaatgatttgaatcggccgc 420
Query: 1979 acaagcgaaggaaaggtgctggggtgattgatgaggcaccggaactagaagataccataa 2038
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 421 acaagcgaaggaaaggtgctggggtgattgatgaggccccggaactagaagataccataa 480
Query: 2039 aggct 2043
|||||
Sbjct: 481 aggct 485
>gnl|LJGI|TC59353 similar to UniRef100_A7QT83 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 776
Score = 71.9 bits (36), Expect = 2e-11
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 371 tcaattgctccttctgcatgcagttaccagatagacccgtcacgactccttgcggccaca 430
|||| |||||| ||||||| ||| | || || || || |||||||||||||| || ||||
Sbjct: 512 tcaactgctccatctgcattcagcttcctgagaggcctgtcacgactccttgtggacaca 571
Query: 431 atttctgcttgaaatgctttgagaaatggattggtcaagggaaa 474
|||||| |||| |||||||||||||||||| | |||||||||
Sbjct: 572 gtttctgtctgaagtgctttgagaaatggattcggcaagggaaa 615