Miyakogusa Predicted Gene

Lj2g3v3339640.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3339640.1 tr|A9T5C3|A9T5C3_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,57.14,2e-16, ,CUFF.40108.1
         (360 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65813 similar to UniRef100_A7Q303 Cluster: Chromosome...   714   0.0  
gnl|LJGI|TC79830 similar to UniRef100_A7Q303 Cluster: Chromosome...   418   e-116

>gnl|LJGI|TC65813 similar to UniRef100_A7Q303 Cluster: Chromosome chr12 scaffold_47,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_47, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (64%)
          Length = 609

 Score =  714 bits (360), Expect = 0.0
 Identities = 360/360 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctaccagagtgactctatcttctcctctagccttcaaaacttcacttctgcccaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  atggctaccagagtgactctatcttctcctctagccttcaaaacttcacttctgcccaaa 109

                                                                       
Query: 61  tcaccatcactttctccagtttcattcagccttggttctcccaaaacaaatgctgttgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tcaccatcactttctccagtttcattcagccttggttctcccaaaacaaatgctgttgtt 169

                                                                       
Query: 121 ggtgtcagagttcatgctaaaataggtggttcagatgaagacaccaagaaaggagagaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ggtgtcagagttcatgctaaaataggtggttcagatgaagacaccaagaaaggagagaag 229

                                                                       
Query: 181 aagaaattcatcaccagagatgaagaaccacaacaatattggcagacagcaggggaaagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 aagaaattcatcaccagagatgaagaaccacaacaatattggcagacagcaggggaaagg 289

                                                                       
Query: 241 gaaggagagaaccccatgaaaacccctcttccttacatcatcatatttggtatgtcaact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gaaggagagaaccccatgaaaacccctcttccttacatcatcatatttggtatgtcaact 349

                                                                       
Query: 301 ccttttgtaatcttggccattgcttttgcaaatggttggattaaggtacctgtgcgatga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ccttttgtaatcttggccattgcttttgcaaatggttggattaaggtacctgtgcgatga 409


>gnl|LJGI|TC79830 similar to UniRef100_A7Q303 Cluster: Chromosome chr12 scaffold_47,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_47, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (64%)
          Length = 830

 Score =  418 bits (211), Expect = e-116
 Identities = 214/215 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctaccagagtgactctatcttctcctctagccttcaaaacttcacttctgcccaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31  atggctaccagagtgactctatcttctcctctagccttcaaaacttcacttctgcccaaa 90

                                                                       
Query: 61  tcaccatcactttctccagtttcattcagccttggttctcccaaaacaaatgctgttgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  tcaccatcactttctccagtttcattcagccttggttctcccaaaacaaatgctgttgtt 150

                                                                       
Query: 121 ggtgtcagagttcatgctaaaataggtggttcagatgaagacaccaagaaaggagagaag 180
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ggtgtcagagttcatgttaaaataggtggttcagatgaagacaccaagaaaggagagaag 210

                                              
Query: 181 aagaaattcatcaccagagatgaagaaccacaaca 215
           |||||||||||||||||||||||||||||||||||
Sbjct: 211 aagaaattcatcaccagagatgaagaaccacaaca 245



 Score =  287 bits (145), Expect = 2e-77
 Identities = 145/145 (100%)
 Strand = Plus / Plus

                                                                       
Query: 216 atattggcagacagcaggggaaagggaaggagagaaccccatgaaaacccctcttcctta 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atattggcagacagcaggggaaagggaaggagagaaccccatgaaaacccctcttcctta 540

                                                                       
Query: 276 catcatcatatttggtatgtcaactccttttgtaatcttggccattgcttttgcaaatgg 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catcatcatatttggtatgtcaactccttttgtaatcttggccattgcttttgcaaatgg 600

                                    
Query: 336 ttggattaaggtacctgtgcgatga 360
           |||||||||||||||||||||||||
Sbjct: 601 ttggattaaggtacctgtgcgatga 625