Miyakogusa Predicted Gene
- Lj2g3v3339500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3339500.1 Non Chatacterized Hit- tr|J3LSR2|J3LSR2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G4,40.35,0.000000000000001,GOLD,GOLD; EMP24_GP25L,GOLD;
EMP24/GP25L/P24 FAMILY PROTEIN,NULL; TRANSMEMBRANE EMP24
DOMAIN-CONTAIN,CUFF.40095.1
(642 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59090 similar to UniRef100_A7Q2Y1 Cluster: Chromosome... 1273 0.0
gnl|LJGI|GO008565 similar to UniRef100_A7Q2Y1 Cluster: Chromosom... 1047 0.0
>gnl|LJGI|TC59090 similar to UniRef100_A7Q2Y1 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 931
Score = 1273 bits (642), Expect = 0.0
Identities = 642/642 (100%)
Strand = Plus / Plus
Query: 1 atgggattgtcgttgattcatgtattgttgtttgcgttaattggggtcttctggaacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 atgggattgtcgttgattcatgtattgttgtttgcgttaattggggtcttctggaacttg 136
Query: 61 aaagcctctgagggtatcagattcgtcatcgatagagacgagtgtttctcccacgatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aaagcctctgagggtatcagattcgtcatcgatagagacgagtgtttctcccacgatgtc 196
Query: 121 aagtacgagggtgacactgtccatatttccttcgttgttattaaggctgattctccatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 aagtacgagggtgacactgtccatatttccttcgttgttattaaggctgattctccatgg 256
Query: 181 cattacggtgatgaaggtgtcgatctcgtggtaaaaggacctgctggtgaacaaattcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cattacggtgatgaaggtgtcgatctcgtggtaaaaggacctgctggtgaacaaattcac 316
Query: 241 gattttcgtgacaagaccagtgaaaagtttgaatttgtggctcacaaatcaggagttcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gattttcgtgacaagaccagtgaaaagtttgaatttgtggctcacaaatcaggagttcac 376
Query: 301 aaattctgcttcacaaacaagtctccatatcatgaaactattgattttgatgtacatgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaattctgcttcacaaacaagtctccatatcatgaaactattgattttgatgtacatgtg 436
Query: 361 ggtcacttctcttactacgagcagcatgcaaaagatgagcatttcacacctttgctggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggtcacttctcttactacgagcagcatgcaaaagatgagcatttcacacctttgctggag 496
Query: 421 cagatagcaaagttggaggaagctctttacaacattcagtttgaacaacattggttagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cagatagcaaagttggaggaagctctttacaacattcagtttgaacaacattggttagag 556
Query: 481 gctcaaactgaccgccaagcaatagtgaatgatgcaatgagccgaagagcaatacataag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gctcaaactgaccgccaagcaatagtgaatgatgcaatgagccgaagagcaatacataag 616
Query: 541 gcactttttgaatcagcagcattaattggcgctagtgcacttcaagtttaccttctgcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gcactttttgaatcagcagcattaattggcgctagtgcacttcaagtttaccttctgcag 676
Query: 601 cgcttgtttgagcgcaagctgggaacctctagagtttagagt 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cgcttgtttgagcgcaagctgggaacctctagagtttagagt 718
>gnl|LJGI|GO008565 similar to UniRef100_A7Q2Y1 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 702
Score = 1047 bits (528), Expect = 0.0
Identities = 538/540 (99%), Gaps = 1/540 (0%)
Strand = Plus / Plus
Query: 1 atgggattgtcgttgattcatgtattgttgtttgcgttaattggggtcttctggaacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 atgggattgtcgttgattcatgtattgttgtttgcgttaattggggtcttctggaacttg 220
Query: 61 aaagcctctgagggtatcagattcgtcatcgatagagacgagtgtttctcccacgatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aaagcctctgagggtatcagattcgtcatcgatagagacgagtgtttctcccacgatgtc 280
Query: 121 aagtacgagggtgacactgtccatatttccttcgttgttattaaggctgattctccatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aagtacgagggtgacactgtccatatttccttcgttgttattaaggctgattctccatgg 340
Query: 181 cattacggtgatgaaggtgtcgatctcgtggtaaaaggacctgctggtgaacaaattcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cattacggtgatgaaggtgtcgatctcgtggtaaaaggacctgctggtgaacaaattcac 400
Query: 241 gattttcgtgacaagaccagtgaaaagtttgaatttgtggctcacaaatcaggagttcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gattttcgtgacaagaccagtgaaaagtttgaatttgtggctcacaaatcaggagttcac 460
Query: 301 aaattctgcttcacaaacaagtctccatatcatgaaactattgattttgatgtacatgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aaattctgcttcacaaacaagtctccatatcatgaaactattgattttgatgtacatgtg 520
Query: 361 ggtcacttctcttactacgagcagcatgcaaaagatgagcatttcacacctttgctggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ggtcacttctcttactacgagcagcatgcaaaagatgagcatttcacacctttgctggag 580
Query: 421 cagatagcaaagttggaggaagctctttacaacattcagtttgaacaacattggttagag 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 581 cagatagcaaagttggaggaagccctttacaacattcagtttgaacaacattggttagag 640
Query: 481 gctcaaactgaccgccaagcaatagtgaatgatgcaatgagccgaagagcaatacataag 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 641 gctcaaactgaccgccaagcaatagtgaatgatgcaatgagccgaagagc-atacataag 699