Miyakogusa Predicted Gene
- Lj2g3v3339480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3339480.1 Non Chatacterized Hit- tr|I1JJT1|I1JJT1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,93.67,0,Ypt/Rab-GAP
domain of gyp1p,Rab-GTPase-TBC domain; Domain in Tre-2, BUB2p, and
Cdc16p. Probable,Rab-,CUFF.40097.1
(1188 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79510 similar to UniRef100_Q1H5B2 Cluster: At3g07890;... 1033 0.0
gnl|LJGI|TC72039 similar to UniRef100_A7PX17 Cluster: Chromosome... 656 0.0
gnl|LJGI|TC72948 similar to UniRef100_A7PX17 Cluster: Chromosome... 268 7e-71
>gnl|LJGI|TC79510 similar to UniRef100_Q1H5B2 Cluster: At3g07890; n=2; Arabidopsis
thaliana|Rep: At3g07890 - Arabidopsis thaliana (Mouse-ear
cress), partial (38%)
Length = 1194
Score = 1033 bits (521), Expect = 0.0
Identities = 540/545 (99%), Gaps = 1/545 (0%)
Strand = Plus / Plus
Query: 1 atgtatggaaccaagagcaaaattgatcttgcctgtgaataccaatctcaagtggcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 atgtatggaaccaagagcaaaattgatcttgcctgtgaataccaatctcaagtggcagtt 709
Query: 61 ttgaggcctagcatccattccagaagggcaaatctgactgtgaaattccaagacctttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ttgaggcctagcatccattccagaagggcaaatctgactgtgaaattccaagacctttat 769
Query: 121 ggtttcacggtggaagggaatgtggatgatgtgaatgtgttgaatgaggtgagggagaag 180
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 770 ggtttcacggtggaagggaatgtggatgatgtgaaggtgttgaatgaggtgagggaaaag 829
Query: 181 gtgaggcaacagggtcgagtttggtgggcattggaggccagcaaaggtgcaaattggtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gtgaggcaacagggtcgagtttggtgggcattggaggccagcaaaggtgcaaattggtat 889
Query: 241 ttgcataccaccattggccaagggagtgccctcacatcatcattgaaattctcagctttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 ttgcataccaccattggccaagggagtgccctcacatcatcattgaaattctcagctttg 949
Query: 301 gctaatgctatcactttgaagaagctcat-caggaaggggattccacctgttcttaggcc 359
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 950 gctaatgctatcactttgaagaagcgcatgcaggaaggggattccacctgttcttaggcc 1009
Query: 360 taaggtttggttttcattgtcaggggctgctaagaaaaagtccacggttcctgagagtta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 taaggtttggttttcattgtcaggggctgctaagaaaaagtccacggttcctgagagtta 1069
Query: 420 ttatgatgatttgacaaaagcagtggatgggaaggtcacccctgctacaagacagataga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 ttatgatgatttgacaaaagcagtggatgggaaggtcacccctgctacaagacagataga 1129
Query: 480 tcatgacctaccgcgaaccttccctggtcacccgtggttggacactactgaggggcattc 539
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1130 tcatgacctaccgcgaaccttccctggtcacccgtgggtggacactactgaggggcattc 1189
Query: 540 tgctc 544
|||||
Sbjct: 1190 tgctc 1194
>gnl|LJGI|TC72039 similar to UniRef100_A7PX17 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 558
Score = 656 bits (331), Expect = 0.0
Identities = 339/342 (99%)
Strand = Plus / Plus
Query: 847 ctcttttcaaagagcctgccttccgagacaactctacgagtgtgggatgttattttctat 906
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 ctcttttcaaagagcctgccttccgagacnactctacgagtgtgggatgttattttctat 60
Query: 907 gagggggctaaggttatatttaacgtagcgttggcaatctttaagatgaaggaaaatgaa 966
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61 gagggggctaaggttatatttaacgtagcgttggccatctttaagatgaaggaaaatgaa 120
Query: 967 ttacttctaacccatcatgttggcgaagtaatcaatgttctgcacatgaccactcatcac 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttacttctaacccatcatgttggcgaagtaatcaatgttctgcacatgaccactcatcac 180
Query: 1027 ctatttgatccagatgatttactgacagtggcatttgatcagataggatccatgacaacc 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctatttgatccagatgatttactgacagtggcatttgatcagataggatccatgacaacc 240
Query: 1087 aacaccatatcaaagcaaaggaagaaacaggaacctgaagtccagaaggagcttgatcag 1146
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacaccatatcaaagccaaggaagaaacaggaacctgaagtccagaaggagcttgatcag 300
Query: 1147 aggatcaggaagctaaattcccttaaaggggatgacaaatag 1188
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggatcaggaagctaaattcccttaaaggggatgacaaatag 342
>gnl|LJGI|TC72948 similar to UniRef100_A7PX17 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 514
Score = 268 bits (135), Expect = 7e-71
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 1054 gtggcatttgatcagataggatccatgacaaccaacaccatatcaaagcaaaggaagaaa 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gtggcatttgatcagataggatccatgacaaccaacaccatatcaaagcaaaggaagaaa 230
Query: 1114 caggaacctgaagtccagaaggagcttgatcagaggatcaggaagctaaattcccttaaa 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 caggaacctgaagtccagaaggagcttgatcagaggatcaggaagctaaattcccttaaa 290
Query: 1174 ggggatgacaaatag 1188
|||||||||||||||
Sbjct: 291 ggggatgacaaatag 305