Miyakogusa Predicted Gene
- Lj2g3v3339470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3339470.1 CUFF.40092.1
(1872 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598537 similar to UniRef100_A7P0H1 Cluster: Chromosom... 1090 0.0
gnl|LJGI|DC592904 weakly similar to UniRef100_A7PX21 Cluster: Ch... 714 0.0
gnl|LJGI|TC74885 similar to UniRef100_A7P0H1 Cluster: Chromosome... 276 5e-73
gnl|LJGI|TC76242 similar to UniRef100_A7QYY5 Cluster: Chromosome... 72 1e-11
>gnl|LJGI|DC598537 similar to UniRef100_A7P0H1 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 550
Score = 1090 bits (550), Expect = 0.0
Identities = 550/550 (100%)
Strand = Plus / Plus
Query: 372 gaaagcttcttatgttgcgcatattaatagctacttagctgaagataaattcatgaagca 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaagcttcttatgttgcgcatattaatagctacttagctgaagataaattcatgaagca 60
Query: 432 gtttcttcctattgatccttcgaccgatgcattgtttgatcttgcaaaagatggagtcct 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttcttcctattgatccttcgaccgatgcattgtttgatcttgcaaaagatggagtcct 120
Query: 492 tctctgcaagcttattaatgttgctgttcctgggaccattgatgagcgagctattaacac 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctctgcaagcttattaatgttgctgttcctgggaccattgatgagcgagctattaacac 180
Query: 552 aaaacgggttcttaatccttgggagaggaatgagaaccacaccctgggtctaaactcagc 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaacgggttcttaatccttgggagaggaatgagaaccacaccctgggtctaaactcagc 240
Query: 612 aaaggctatcgggtgcacagtggttaatattggaacacaggactttgttgaaggaagacc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaggctatcgggtgcacagtggttaatattggaacacaggactttgttgaaggaagacc 300
Query: 672 acatctggtacttggtgtgatttcacaaataatcaagattcaattgttagctgatctcaa 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acatctggtacttggtgtgatttcacaaataatcaagattcaattgttagctgatctcaa 360
Query: 732 tctgaagaaaactcctcaacttgtggaattggtggaagatgacaaggatgtggaggagct 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctgaagaaaactcctcaacttgtggaattggtggaagatgacaaggatgtggaggagct 420
Query: 792 tatcagtttaccacctgacaaggttttactgaaatggatgaatttccacttgaagaaatc 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatcagtttaccacctgacaaggttttactgaaatggatgaatttccacttgaagaaatc 480
Query: 852 tggatatcagaaagaagttacaaacttctcttccgatgtgaaggatggcgaggcttatgc 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggatatcagaaagaagttacaaacttctcttccgatgtgaaggatggcgaggcttatgc 540
Query: 912 ttacttgctt 921
||||||||||
Sbjct: 541 ttacttgctt 550
>gnl|LJGI|DC592904 weakly similar to UniRef100_A7PX21 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 587
Score = 714 bits (360), Expect = 0.0
Identities = 360/360 (100%)
Strand = Plus / Plus
Query: 1 atgtctggtttcgtgggtgtccttgtttctgatcagtggcttcagagccagttcacccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 atgtctggtttcgtgggtgtccttgtttctgatcagtggcttcagagccagttcacccaa 287
Query: 61 gtcgaactgagaaccctcaaatccaagtatgtctccgaaagaactcaatcaggacgtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gtcgaactgagaaccctcaaatccaagtatgtctccgaaagaactcaatcaggacgtgtt 347
Query: 121 actgtcggaaatttaccacctatttttaagaaattgaagactttcactcaagttttcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 actgtcggaaatttaccacctatttttaagaaattgaagactttcactcaagttttcacc 407
Query: 181 gaggatgagattaaagctatcttggcagactcatatcacaacatggatgaagaaattgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gaggatgagattaaagctatcttggcagactcatatcacaacatggatgaagaaattgac 467
Query: 241 tttgaatccttccttagggcacatttaaatttgcaaactcgagccacagccaaagatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tttgaatccttccttagggcacatttaaatttgcaaactcgagccacagccaaagatggt 527
Query: 301 ggttcaaaaagtacttcttcattcttgaaggcggctacaactactattcatcatgctatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ggttcaaaaagtacttcttcattcttgaaggcggctacaactactattcatcatgctatt 587
>gnl|LJGI|TC74885 similar to UniRef100_A7P0H1 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 703
Score = 276 bits (139), Expect = 5e-73
Identities = 142/143 (99%)
Strand = Plus / Plus
Query: 1730 agttgaattcaacatatattatcagtgttgcccgaaaacttggatgctccatattcctgt 1789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agttgaattcaacatatattatcagtgttgcccgaaaacttggatgctccatattcctgt 60
Query: 1790 tacctgaggacataatagaggtcaaccagaagatgattctcactttaactgctagcatca 1849
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacctgaggacataatagaggtcgaccagaagatgattctcactttaactgctagcatca 120
Query: 1850 tgtactggagcctgcagcattct 1872
|||||||||||||||||||||||
Sbjct: 121 tgtactggagcctgcagcattct 143
>gnl|LJGI|TC76242 similar to UniRef100_A7QYY5 Cluster: Chromosome undetermined
scaffold_259, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_259, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(32%)
Length = 807
Score = 71.9 bits (36), Expect = 1e-11
Identities = 138/172 (80%)
Strand = Plus / Plus
Query: 1402 ttttccttagtaaatgttgctggtaatgatattgtacaagggaataagaagctcttacta 1461
|||||||| || ||||||||||| ||||||||||| || || ||||| || | || ||
Sbjct: 5 ttttccttggttaatgttgctggaaatgatattgtgcagggaaataaaaaattaatatta 64
Query: 1462 gcatttttgtggcagctgatgagatttactatgcttcaacttctgaaaaacttgagatca 1521
|| | |||||||||| ||||| ||| | ||| || ||||||||||| ||||||||||
Sbjct: 65 gcttatttgtggcagttgatgcgatgcaatattctccaacttctgaagaacttgagattt 124
Query: 1522 cactcccaaggcaaagagatcactgatgctgatatattaaactgggcaaaca 1573
||||| || || || || || |||||||||||||| ||| | ||||| ||||
Sbjct: 125 cactctcatgggaaggaaattactgatgctgatattttagaatgggccaaca 176