Miyakogusa Predicted Gene
- Lj2g3v3339450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3339450.1 Non Chatacterized Hit- tr|I3T7F2|I3T7F2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Four repeated domains in the
Fasciclin I fam,FAS1 d,CUFF.40093.1
(599 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63054 similar to UniRef100_A9XTK8 Cluster: Fasciclin-... 1187 0.0
gnl|LJGI|GO035877 similar to UniRef100_A9XTK8 Cluster: Fasciclin... 1041 0.0
>gnl|LJGI|TC63054 similar to UniRef100_A9XTK8 Cluster: Fasciclin-like arabinogalactan
protein 3; n=1; Gossypium hirsutum|Rep: Fasciclin-like
arabinogalactan protein 3 - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (69%)
Length = 1051
Score = 1187 bits (599), Expect = 0.0
Identities = 599/599 (100%)
Strand = Plus / Plus
Query: 1 atggagttttccatgattttcattctcagcaacactctgctgcttctcagttcatcagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggagttttccatgattttcattctcagcaacactctgctgcttctcagttcatcagca 189
Query: 61 tttgccaaaactgttagccctccctctccccctctgagcccgactccggctcccgcccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tttgccaaaactgttagccctccctctccccctctgagcccgactccggctcccgcccca 249
Query: 121 gcaccggatttcgttaacctcactgagttactcgcggttgctggtcccttccacaccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gcaccggatttcgttaacctcactgagttactcgcggttgctggtcccttccacaccttc 309
Query: 181 cttgaatacctcgagtccacaaaagtgattgacactttccaaaaccaagccaacaacact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cttgaatacctcgagtccacaaaagtgattgacactttccaaaaccaagccaacaacact 369
Query: 241 gaagaaggaatcaccatctttgtgccaaaagatagttccttctcagctctgaagaaacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaagaaggaatcaccatctttgtgccaaaagatagttccttctcagctctgaagaaacct 429
Query: 301 tccctgtccaaactcaccagtgaccagttaaagcaagtgatcctcttccatgccttgcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tccctgtccaaactcaccagtgaccagttaaagcaagtgatcctcttccatgccttgcca 489
Query: 361 aaatactactctcttgctgacttcaaaaaccttagccaaactggttccactcccacattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaatactactctcttgctgacttcaaaaaccttagccaaactggttccactcccacattt 549
Query: 421 gctggtggaagttactccttgaatttcactgatgattctggaactgtgcatatcaattca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gctggtggaagttactccttgaatttcactgatgattctggaactgtgcatatcaattca 609
Query: 481 ggatggtcaaagaccaaggttactagtgctgttcattccacagatcctgttgcaatatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggatggtcaaagaccaaggttactagtgctgttcattccacagatcctgttgcaatatat 669
Query: 541 gaggttggtaaggttctccttcctgaggccgtttttggcactgatattcctccaacacc 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gaggttggtaaggttctccttcctgaggccgtttttggcactgatattcctccaacacc 728
>gnl|LJGI|GO035877 similar to UniRef100_A9XTK8 Cluster: Fasciclin-like arabinogalactan
protein 3; n=1; Gossypium hirsutum|Rep: Fasciclin-like
arabinogalactan protein 3 - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (53%)
Length = 748
Score = 1041 bits (525), Expect = 0.0
Identities = 580/589 (98%), Gaps = 7/589 (1%)
Strand = Plus / Plus
Query: 1 atggagttttccatgattttcattctcagcaacactctgctgcttctcagttcatcagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 atggagttttccatgattttcattctcagcaacactctgctgcttctcagttcatcagca 225
Query: 61 tttgccaaaactgttagccctccctctccccctctgagcccgactccggctcccgcccca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 226 tttgccaaaactgttagccctccctctccccctctgagcccgactccggctcccacccca 285
Query: 121 gcaccggatttcgttaacctcactgagttactcgcggttgctggtcccttccacaccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gcaccggatttcgttaacctcactgagttactcgcggttgctggtcccttccacaccttc 345
Query: 181 cttgaatacctcgagtccacaaaagtgattgacactttccaaaaccaagccaacaacact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cttgaatacctcgagtccacaaaagtgattgacactttccaaaaccaagccaacaacact 405
Query: 241 gaagaaggaatcaccatctttgtgccaaaagatagttccttctcagctctgaagaaacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gaagaaggaatcaccatctttgtgccaaaagatagttccttctcagctctgaagaaacct 465
Query: 301 tccctgtccaaactcaccagtgaccagttaaagcaagtgatcctcttccatgccttgcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tccctgtccaaactcaccagtgaccagttaaagcaagtgatcctcttccatgccttgcca 525
Query: 361 aaatactactctcttgctgacttcaaaaaccttagccaaactggttccactcccacattt 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aaatactattctcttgctgacttcaaaaaccttagccaaactggttccactcccacattt 585
Query: 421 gctggtggaagttactccttgaatttcactgatgattctggaactgtgcatatcaattca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gctggtggaagttactccttgaatttcactgatgattctggaactgtgcatatcaattca 645
Query: 481 ggatggtcaaagaccaaggttactagtgctgttcattccacagatcctgttgcaatatat 540
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 -gatggtcaaagacc-aggttactagtgctgttcattccacagatcctgttgcaatatat 703
Query: 541 gaggttggtaaggttctccttcctgaggccgtttttggcactgatattc 589
|||| |||||| ||||| |||||||| |||| |||||||||||||||||
Sbjct: 704 gagg-tggtaa-gttct-cttcctga-gccg-ttttggcactgatattc 747