Miyakogusa Predicted Gene
- Lj2g3v3339380.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3339380.1 gi|2367428|gb|AF000402.1|.path1.1
(579 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70623 UniRef100_O22306 Cluster: Nlj21; n=1; Lotus jap... 910 0.0
gnl|LJGI|TC61445 homologue to UniRef100_O22306 Cluster: Nlj21; n... 478 e-134
>gnl|LJGI|TC70623 UniRef100_O22306 Cluster: Nlj21; n=1; Lotus japonicus|Rep: Nlj21 -
Lotus japonicus, complete
Length = 1048
Score = 910 bits (459), Expect = 0.0
Identities = 473/480 (98%)
Strand = Plus / Plus
Query: 1 atggccactgctcaggttgcatcagcaaactctgccctccatgatgacacaactaaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atggccactgctcaggttgcatcagcaaactctgccctccatgatgacacaactaaggct 230
Query: 61 tcattgaaggatcatgaggagaaaaccacagaacaagttgttgaaactcaaacaccagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tcattgaaggatcatgaggagaaaaccacagaacaagttgttgaaactcaaacaccagaa 290
Query: 121 ccagaacctgtctctgagaaaaccaaagaagaagattctgcagttactgaggcctcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ccagaacctgtctctgagaaaaccaaagaagaagattctgcagttactgaggcctcagaa 350
Query: 181 ccagaacccacagaagacaatccttcaattgaagctgagacaacagaggtggtagaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ccagaacccacagaagacaatccttcaattgaagctgagacaacagaggtggtagaagaa 410
Query: 241 gttgtgactgtgacagtcacagatgagccaaaagttgaggagaagacagatggggaagcn 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gttgtgactgtgacagtcacagatgagccaaaagttgaggagaagacagatggggaagca 470
Query: 301 nnnnnngaagcaactgagacaaaggaaaccaaagaaagtgctgatcctgttgaagttcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aaaaaagaagcaactgagacaaaggaaaccaaagaaagtgctgatcctgttgaagttcag 530
Query: 361 gcaccagaagctggagaagaacctgagacagtgactcttaaagaggatgcttcgaaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gcaccagaagctggagaagaacctgagacagtgactcttaaagaggatgcttcgaaagaa 590
Query: 421 gaggagaaggtagctgagcctgaagctaaggaagaggttgttaatacagaagccccggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gaggagaaggtagctgagcctgaagctaaggaagaggttgttaatacagaagccccggat 650
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 545 tgatcaaagtggcaccagctgagaagactgagtga 579
|||||||||||||||||||||||||||||||||||
Sbjct: 715 tgatcaaagtggcaccagctgagaagactgagtga 749
>gnl|LJGI|TC61445 homologue to UniRef100_O22306 Cluster: Nlj21; n=1; Lotus
japonicus|Rep: Nlj21 - Lotus japonicus, partial (62%)
Length = 716
Score = 478 bits (241), Expect = e-134
Identities = 244/245 (99%)
Strand = Plus / Plus
Query: 1 atggccactgctcaggttgcatcagcaaactctgccctccatgatgacacaactaaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atggccactgctcaggttgcatcagcaaactctgccctccatgatgacacaactaaggct 141
Query: 61 tcattgaaggatcatgaggagaaaaccacagaacaagttgttgaaactcaaacaccagaa 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 142 tcattgaaggatcatgaggagaaagccacagaacaagttgttgaaactcaaacaccagaa 201
Query: 121 ccagaacctgtctctgagaaaaccaaagaagaagattctgcagttactgaggcctcagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ccagaacctgtctctgagaaaaccaaagaagaagattctgcagttactgaggcctcagaa 261
Query: 181 ccagaacccacagaagacaatccttcaattgaagctgagacaacagaggtggtagaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccagaacccacagaagacaatccttcaattgaagctgagacaacagaggtggtagaagaa 321
Query: 241 gttgt 245
|||||
Sbjct: 322 gttgt 326
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 545 tgatcaaagtggcaccagctgagaagactgagtga 579
|||||||||||||||||||||||||||||||||||
Sbjct: 410 tgatcaaagtggcaccagctgagaagactgagtga 444
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 451 gaagaggttgttaatacagaagccccggat 480
||||| ||||||||||||||||||||||||
Sbjct: 316 gaagaagttgttaatacagaagccccggat 345