Miyakogusa Predicted Gene

Lj2g3v3339130.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3339130.1 tr|G7K967|G7K967_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_5g061410 PE=4 SV=1,31.16,2e-18,F-box domain,F-box
domain, cyclin-like; RNI-like,NULL; FAMILY NOT NAMED,NULL; FBD,FBD;
F-box,F-box d,CUFF.40098.1
         (1260 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC599923 similar to UniRef100_A7QK60 Cluster: Chromosom...   904   0.0  
gnl|LJGI|TC79535 similar to UniRef100_A2Q1M0 Cluster: Cyclin-lik...   543   e-154
gnl|LJGI|TC62962 similar to UniRef100_A2Q1U7 Cluster: Cyclin-lik...    52   9e-06

>gnl|LJGI|DC599923 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_111, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 570

 Score =  904 bits (456), Expect = 0.0
 Identities = 456/456 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttgatgttgatgttatcagcaccttaccagatgagttattgtatcacatactctct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atggttgatgttgatgttatcagcaccttaccagatgagttattgtatcacatactctct 174

                                                                       
Query: 61  tttctcccaacgaaacaagctttggccaccggagttctttccaagaggtgggctaaccta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tttctcccaacgaaacaagctttggccaccggagttctttccaagaggtgggctaaccta 234

                                                                       
Query: 121 ccccggcctttgcaagtccttcaccttgatgaagatggttctaatcccacacgctgccgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ccccggcctttgcaagtccttcaccttgatgaagatggttctaatcccacacgctgccgt 294

                                                                       
Query: 181 tccttcataagcctagtggacacacttatgctctcccatcacaaccaacacattagtatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tccttcataagcctagtggacacacttatgctctcccatcacaaccaacacattagtatc 354

                                                                       
Query: 241 acatccctgcacctcaaatacaacggttcttcacatcttttgtcacggttcaaactcgac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 acatccctgcacctcaaatacaacggttcttcacatcttttgtcacggttcaaactcgac 414

                                                                       
Query: 301 cagtggatggccgccgcgaaacaacgtcacattcaggatttgacactctcactgccaagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cagtggatggccgccgcgaaacaacgtcacattcaggatttgacactctcactgccaagc 474

                                                                       
Query: 361 tttcacttgccgccttgcattctgacctcccaaactctcgtactcctcgatctcacttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tttcacttgccgccttgcattctgacctcccaaactctcgtactcctcgatctcacttct 534

                                               
Query: 421 ttatttattcaaccttcatcttccgttcatcttccg 456
           ||||||||||||||||||||||||||||||||||||
Sbjct: 535 ttatttattcaaccttcatcttccgttcatcttccg 570


>gnl|LJGI|TC79535 similar to UniRef100_A2Q1M0 Cluster: Cyclin-like F-box; FBD; n=1;
            Medicago truncatula|Rep: Cyclin-like F-box; FBD -
            Medicago truncatula (Barrel medic), partial (5%)
          Length = 533

 Score =  543 bits (274), Expect = e-154
 Identities = 274/274 (100%)
 Strand = Plus / Plus

                                                                        
Query: 987  agatgatcttcgatttgcagcatacatcctgcaaaaggcgagggttttacaggtcatgac 1046
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    agatgatcttcgatttgcagcatacatcctgcaaaaggcgagggttttacaggtcatgac 60

                                                                        
Query: 1047 aatccattgtttcgatatgtgttactgtaatagctatcaccgccgacttgttgaaatatt 1106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aatccattgtttcgatatgtgttactgtaatagctatcaccgccgacttgttgaaatatt 120

                                                                        
Query: 1107 gtcctcctacccaaagatctctcatgcatgtgaactttcagttgttactaaaggaaataa 1166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gtcctcctacccaaagatctctcatgcatgtgaactttcagttgttactaaaggaaataa 180

                                                                        
Query: 1167 agagaatgaagctagcccatggtgggcgccggatagaccttttatgtttatagcagcttc 1226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  agagaatgaagctagcccatggtgggcgccggatagaccttttatgtttatagcagcttc 240

                                              
Query: 1227 gttatattttctatatttagttcaaagatagaga 1260
            ||||||||||||||||||||||||||||||||||
Sbjct: 241  gttatattttctatatttagttcaaagatagaga 274


>gnl|LJGI|TC62962 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box; FBD -
           Medicago truncatula (Barrel medic), partial (17%)
          Length = 741

 Score = 52.0 bits (26), Expect = 9e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 51  catactctcttttctcccaacgaaacaagc 80
           ||||||||||||||||||||| ||||||||
Sbjct: 194 catactctcttttctcccaaccaaacaagc 223