Miyakogusa Predicted Gene

Lj2g3v3338870.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3338870.1 Non Chatacterized Hit- tr|I3SKA1|I3SKA1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,98.31,0,Possibly
involved in carbohydrate binding,X8; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; X8,X8,CUFF.40056.1
         (360 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO041329 similar to UniRef100_A7R383 Cluster: Chromosom...   428   e-119
gnl|LJGI|GO033653 UniRef100_Q76L72 Cluster: NADH-ubiquinone oxid...   153   9e-37
gnl|LJGI|TC63212 weakly similar to UniRef100_A7PRJ1 Cluster: Chr...    56   2e-07

>gnl|LJGI|GO041329 similar to UniRef100_A7R383 Cluster: Chromosome undetermined
           scaffold_490, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_490,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (75%)
          Length = 216

 Score =  428 bits (216), Expect = e-119
 Identities = 216/216 (100%)
 Strand = Plus / Minus

                                                                       
Query: 123 gttgcagggggccttagattgggcttgtgggaaaggaggtgcagattgcagcaagattca 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gttgcagggggccttagattgggcttgtgggaaaggaggtgcagattgcagcaagattca 157

                                                                       
Query: 183 ggagaaccaaccttgctacttcccaaacacattgaaagatcatgcttcttatgccttcaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ggagaaccaaccttgctacttcccaaacacattgaaagatcatgcttcttatgccttcaa 97

                                                                       
Query: 243 cagctactttcaaaagtccaagcatagtggtggttcttgccactttagaggtgctgccat 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  cagctactttcaaaagtccaagcatagtggtggttcttgccactttagaggtgctgccat 37

                                               
Query: 303 gacaacagaagaggatcctagtcatggttcttgcca 338
           ||||||||||||||||||||||||||||||||||||
Sbjct: 36  gacaacagaagaggatcctagtcatggttcttgcca 1


>gnl|LJGI|GO033653 UniRef100_Q76L72 Cluster: NADH-ubiquinone oxidoreductase chain 4;
           n=1; Euphausia superba|Rep: NADH-ubiquinone, partial
           (2%)
          Length = 140

 Score =  153 bits (77), Expect = 9e-37
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaatgtggatgctgaagttcatgcttcctctacttttcctggccatgattcctcca 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  atggcaatgtgtatgctgaagttcatgcttcctctacttttcctggccatgattcctcca 119

                                
Query: 61  aaaactgcctatgccgaattc 81
           |||||||||||||||||||||
Sbjct: 120 aaaactgcctatgccgaattc 140


>gnl|LJGI|TC63212 weakly similar to UniRef100_A7PRJ1 Cluster: Chromosome chr14
           scaffold_27, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (31%)
          Length = 1543

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 223 catgcttcttatgccttcaacagctact 250
           ||||||||||||||||||||||||||||
Sbjct: 726 catgcttcttatgccttcaacagctact 753