Miyakogusa Predicted Gene
- Lj2g3v3338860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3338860.1 tr|G7KEP4|G7KEP4_MEDTR Histidine kinase cytokinin
receptor OS=Medicago truncatula GN=MTR_5g097410 PE,75.86,0,seg,NULL;
CHASE,CHASE; coiled-coil,NULL; no description,NULL; no
description,CHASE; Homodimeric doma,CUFF.40055.1
(1929 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598018 similar to UniRef100_A7Q329 Cluster: Chromosom... 1122 0.0
gnl|LJGI|TC57121 UniRef100_A0PEY0 Cluster: Cytokinin receptor 1;... 62 1e-08
gnl|LJGI|TC66815 UniRef100_A3QVR9 Cluster: Histidine kinase 2; n... 54 3e-06
>gnl|LJGI|DC598018 similar to UniRef100_A7Q329 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 574
Score = 1122 bits (566), Expect = 0.0
Identities = 572/574 (99%)
Strand = Plus / Plus
Query: 1037 cagcatttgagagaccacttactagtggtgttgcttatgcttttaaagttctccactctg 1096
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 1 cagcatttgagagaccacttactaggggtgttgcttatgcctttaaagttctccactctg 60
Query: 1097 aaaggattcattttgagaaccagcatgggtggacaattaagaaaatggaatctgagaatg 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaggattcattttgagaaccagcatgggtggacaattaagaaaatggaatctgagaatg 120
Query: 1157 aggcattagttcaagattgcattcctgaaaatttggatccggcacccattcaggatgaat 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggcattagttcaagattgcattcctgaaaatttggatccggcacccattcaggatgaat 180
Query: 1217 atgcacccgtgatatttgctcaagaaacagtttcccatattgtatctattgacatgatgt 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgcacccgtgatatttgctcaagaaacagtttcccatattgtatctattgacatgatgt 240
Query: 1277 cagggaaggaggaccgtgagaatattttgcgagcaagagcctctggaaaaggggttttga 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagggaaggaggaccgtgagaatattttgcgagcaagagcctctggaaaaggggttttga 300
Query: 1337 catccccttttaaactactaaagtccaatcacttgggtgttgtacttacatttgctgtct 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catccccttttaaactactaaagtccaatcacttgggtgttgtacttacatttgctgtct 360
Query: 1397 ataactctaaacttcctccagatgcaacagtggagcagcgtgttgaagctactgtggggt 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ataactctaaacttcctccagatgcaacagtggagcagcgtgttgaagctactgtggggt 420
Query: 1457 atctgggtgcatcttatgatattccatcactggtggacaagcttctccaccaacttgcta 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atctgggtgcatcttatgatattccatcactggtggacaagcttctccaccaacttgcta 480
Query: 1517 gcaagcaaaccattgttgtaaatgtttatgacacaactaatgcatcttcacctattgcaa 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcaagcaaaccattgttgtaaatgtttatgacacaactaatgcatcttcacctattgcaa 540
Query: 1577 tgtatggtactgatgttgctgatactggcctgct 1610
||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtatggtactgatgttgctgatactggcctgct 574
>gnl|LJGI|TC57121 UniRef100_A0PEY0 Cluster: Cytokinin receptor 1; n=1; Lotus
japonicus|Rep: Cytokinin receptor 1 - Lotus japonicus,
complete
Length = 3778
Score = 61.9 bits (31), Expect = 1e-08
Identities = 97/119 (81%)
Strand = Plus / Plus
Query: 1209 ggatgaatatgcacccgtgatatttgctcaagaaacagtttcccatattgtatctattga 1268
|||||| |||||| | ||||||||||| || ||||| || || | ||| |||||||||
Sbjct: 790 ggatgagtatgcagcagtgatatttgcacaggaaactgtctcttaccttgaatctattga 849
Query: 1269 catgatgtcagggaaggaggaccgtgagaatattttgcgagcaagagcctctggaaaag 1327
|||||||| ||| |||||||||| ||||| |||||| | || |||||| |||| ||||
Sbjct: 850 tatgatgtctggggaggaggaccgagagaacattttgagggctagagccactgggaaag 908
>gnl|LJGI|TC66815 UniRef100_A3QVR9 Cluster: Histidine kinase 2; n=1; Lotus
japonicus|Rep: Histidine kinase 2 - Lotus japonicus,
complete
Length = 2992
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1210 gatgaatatgcacccgtgatatttgctcaagaaac 1244
||||| |||||||| ||||||||||||||||||||
Sbjct: 481 gatgagtatgcaccagtgatatttgctcaagaaac 515