Miyakogusa Predicted Gene
- Lj2g3v3337760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3337760.1 Non Chatacterized Hit- tr|I1JJQ5|I1JJQ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57528 PE,91.59,0,MLP3.23
PROTEIN,NULL; VERNALIZATION-INSENSITIVE PROTEIN 3,NULL;
ARATH130DUF,Protein of unknown funct,CUFF.40044.1
(1046 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60696 similar to UniRef100_A7Q330 Cluster: Chromosome... 1409 0.0
gnl|LJGI|TC73351 similar to UniRef100_Q84N37 Cluster: Potyvirus ... 642 0.0
gnl|LJGI|TC69870 similar to UniRef100_Q84N37 Cluster: Potyvirus ... 412 e-114
gnl|LJGI|AV415529 homologue to UniRef100_Q84N37 Cluster: Potyvir... 363 1e-99
gnl|LJGI|TC79650 similar to UniRef100_Q84N37 Cluster: Potyvirus ... 250 2e-65
>gnl|LJGI|TC60696 similar to UniRef100_A7Q330 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 818
Score = 1409 bits (711), Expect = 0.0
Identities = 711/711 (100%)
Strand = Plus / Plus
Query: 1 atgctccctccgcggcagcaatcacgggttggaggactaccgacgtctctgtctctggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atgctccctccgcggcagcaatcacgggttggaggactaccgacgtctctgtctctggtt 167
Query: 61 tcttcagatcctcctcgcctttccccggaggaacctaggtcaaactttgacgccctccgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 tcttcagatcctcctcgcctttccccggaggaacctaggtcaaactttgacgccctccgt 227
Query: 121 gaatctcctactgaaagtgccaattctcgagaaaccttcccgactgcagatgcaattgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gaatctcctactgaaagtgccaattctcgagaaaccttcccgactgcagatgcaattgct 287
Query: 181 gcaaagaagatggagaatggaaaagctgagatcaatttccctgatcagtcgattattcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gcaaagaagatggagaatggaaaagctgagatcaatttccctgatcagtcgattattcgt 347
Query: 241 cgtgtttccagcgcagacaagattagtcttcaggacattgcaagagaaagagttgatgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 cgtgtttccagcgcagacaagattagtcttcaggacattgcaagagaaagagttgatgtg 407
Query: 301 atctgtgaaaaaatgcatcgtctacctgaagagtttctggaagagctgaagagtggactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atctgtgaaaaaatgcatcgtctacctgaagagtttctggaagagctgaagagtggactt 467
Query: 361 cgagtgatccttgagggagggaatggatcgcagcatagagaggagtttttcgttttgcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 cgagtgatccttgagggagggaatggatcgcagcatagagaggagtttttcgttttgcag 527
Query: 421 aagcttgttcagagtagagctgatttaacagccaagactttgataagagcgcatcgtgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aagcttgttcagagtagagctgatttaacagccaagactttgataagagcgcatcgtgtg 587
Query: 481 cagcttgaaatccttgttgccataaacactggaattcagggattcttacatcctagcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cagcttgaaatccttgttgccataaacactggaattcagggattcttacatcctagcatc 647
Query: 541 agtttatctcagacttcattgattgaaatatttgtgtataagagatgcagaaacatagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 agtttatctcagacttcattgattgaaatatttgtgtataagagatgcagaaacatagct 707
Query: 601 tgccaaaaccagcttccggctgatgattgtacctgtgaaacatgcaccaacaacaatggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tgccaaaaccagcttccggctgatgattgtacctgtgaaacatgcaccaacaacaatggc 767
Query: 661 ttctgcaacctctgcatgtgtgttatctgcagcaagtttgactttgaagta 711
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ttctgcaacctctgcatgtgtgttatctgcagcaagtttgactttgaagta 818
>gnl|LJGI|TC73351 similar to UniRef100_Q84N37 Cluster: Potyvirus VPg interacting
protein; n=1; Pisum sativum|Rep: Potyvirus VPg
interacting protein - Pisum sativum (Garden pea), partial
(64%)
Length = 1252
Score = 642 bits (324), Expect = 0.0
Identities = 327/328 (99%)
Strand = Plus / Plus
Query: 708 agtaaatccctgccgctggattggatgtgacttgtgttctcattggactcacacagattg 767
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtaaatacctgccgctggattggatgtgacttgtgttctcattggactcacacagattg 60
Query: 768 tgccattcgtgagcaacttatttgcatgggccctactgtaaagagtggagcagggccaag 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgccattcgtgagcaacttatttgcatgggccctactgtaaagagtggagcagggccaag 120
Query: 828 tgaaatggttttcaggtgtcaagcatgcaataggacttcagaactgttgggttgggttaa 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaatggttttcaggtgtcaagcatgcaataggacttcagaactgttgggttgggttaa 180
Query: 888 agatgtcttccagcactgtgctccatcatgggatggggaggccttaatgagggaacttga 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatgtcttccagcactgtgctccatcatgggatggggaggccttaatgagggaacttga 240
Query: 948 ttttgtaagtaggatctttcatggtagtaaagaccctcgagggaggaaactcttttggaa 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttgtaagtaggatctttcatggtagtaaagaccctcgagggaggaaactcttttggaa 300
Query: 1008 ctgtgatgatctcaaggaaaaactgaag 1035
||||||||||||||||||||||||||||
Sbjct: 301 ctgtgatgatctcaaggaaaaactgaag 328
>gnl|LJGI|TC69870 similar to UniRef100_Q84N37 Cluster: Potyvirus VPg interacting
protein; n=1; Pisum sativum|Rep: Potyvirus VPg
interacting protein - Pisum sativum (Garden pea), partial
(66%)
Length = 1405
Score = 412 bits (208), Expect = e-114
Identities = 307/340 (90%)
Strand = Plus / Plus
Query: 686 tctgcagcaagtttgactttgaagtaaatccctgccgctggattggatgtgacttgtgtt 745
|||||| |||||||||||||||||| ||| | |||||||||||||||||||| |||||||
Sbjct: 3 tctgcaacaagtttgactttgaagtgaatacatgccgctggattggatgtgatttgtgtt 62
Query: 746 ctcattggactcacacagattgtgccattcgtgagcaacttatttgcatgggccctactg 805
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 63 ctcattggactcacacagattgtgccattcgtgagcaacttatttgcatgggcccttccg 122
Query: 806 taaagagtggagcagggccaagtgaaatggttttcaggtgtcaagcatgcaataggactt 865
| ||||| |||||||| || |||||||||||||| ||||||| |||||||||||||| |
Sbjct: 123 tgaagagcggagcaggaccgagtgaaatggtttttaggtgtcgggcatgcaataggacgt 182
Query: 866 cagaactgttgggttgggttaaagatgtcttccagcactgtgctccatcatgggatgggg 925
| |||||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||| |
Sbjct: 183 cggaactgttaggttgggttaaagacgtcttccagcattgtgcgccatcttgggatggag 242
Query: 926 aggccttaatgagggaacttgattttgtaagtaggatctttcatggtagtaaagaccctc 985
||||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||| |
Sbjct: 243 aggccttcgtgagggaacttgattatgtaagtaggatcttccatgttagtaaagaccccc 302
Query: 986 gagggaggaaactcttttggaactgtgatgatctcaagga 1025
|||||||||| || | |||||| ||||| |||||||||||
Sbjct: 303 gagggaggaagctatattggaagtgtgacgatctcaagga 342
>gnl|LJGI|AV415529 homologue to UniRef100_Q84N37 Cluster: Potyvirus VPg interacting
protein; n=1; Pisum sativum|Rep: Potyvirus VPg
interacting protein - Pisum sativum (Garden pea),
partial (12%)
Length = 299
Score = 363 bits (183), Expect = 1e-99
Identities = 183/183 (100%)
Strand = Plus / Plus
Query: 404 agtttttcgttttgcagaagcttgttcagagtagagctgatttaacagccaagactttga 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 agtttttcgttttgcagaagcttgttcagagtagagctgatttaacagccaagactttga 176
Query: 464 taagagcgcatcgtgtgcagcttgaaatccttgttgccataaacactggaattcagggat 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 taagagcgcatcgtgtgcagcttgaaatccttgttgccataaacactggaattcagggat 236
Query: 524 tcttacatcctagcatcagtttatctcagacttcattgattgaaatatttgtgtataaga 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tcttacatcctagcatcagtttatctcagacttcattgattgaaatatttgtgtataaga 296
Query: 584 gat 586
|||
Sbjct: 297 gat 299
>gnl|LJGI|TC79650 similar to UniRef100_Q84N37 Cluster: Potyvirus VPg interacting
protein; n=1; Pisum sativum|Rep: Potyvirus VPg
interacting protein - Pisum sativum (Garden pea),
partial (22%)
Length = 716
Score = 250 bits (126), Expect = 2e-65
Identities = 268/314 (85%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 184 aagaagatggagaatggaaaagctgagatcaatttccctgatcagtcgattattcgtcgt 243
|||||| |||||||||||||||| ||||| |||| | ||| ||||| |||||||||||
Sbjct: 388 aagaaggtggagaatggaaaagcagagattaattgcattgaacagtcagttattcgtcgt 447
Query: 244 gtttccagcgcagacaagattagtcttcaggacattgcaagagaaagagttgatgtgatc 303
||||| ||||||||||| |||| ||| |||||||||||||||||||| |||||| | |||
Sbjct: 448 gtttctagcgcagacaaaattactctccaggacattgcaagagaaagtgttgatataatc 507
Query: 304 tgtgaaaaaatgcatcgtctacctgaagagtttctggaagagctgaagagtggacttcga 363
||||||||||||||||| || ||||| || ||||| |||||| |||| | |||||||||
Sbjct: 508 tgtgaaaaaatgcatcgccttcctgaggaatttctagaagagatgaaaaatggacttcgt 567
Query: 364 gtgatccttga-gggagggaatggatcgcagcatagagaggagtttttcgttttgcagaa 422
| |||||||| |||||| ||||| || || ||||||||||| |||||| ||||||||||
Sbjct: 568 cttatccttgaggggaggtaatggttcacaacatagagaggaatttttcattttgcagaa 627
Query: 423 gcttgttcagagtagagctgatttaacagccaagactttgataagagcgcatcgtgtgca 482
||||| ||||||||| ||||||| ||| ||| ||| || | ||||| |||||||||||
Sbjct: 628 acttgtgcagagtagaactgatttgacacccaggacactggttagagcccatcgtgtgca 687
Query: 483 gcttgaaatccttg 496
| ||||||||||||
Sbjct: 688 gattgaaatccttg 701