Miyakogusa Predicted Gene
- Lj2g3v3336110.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3336110.1 Non Chatacterized Hit- tr|G7J261|G7J261_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,63.29,6e-17,seg,NULL,CUFF.40026.1
(405 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO012187 similar to UniRef100_A7NZQ4 Cluster: Chromosom... 565 e-161
gnl|LJGI|TC79166 similar to UniRef100_A7NZQ4 Cluster: Chromosome... 94 8e-19
>gnl|LJGI|GO012187 similar to UniRef100_A7NZQ4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 677
Score = 565 bits (285), Expect = e-161
Identities = 299/306 (97%)
Strand = Plus / Plus
Query: 100 cagcatccacagagccaaaagctagaagctttctctgcaaactcctcttcatcaagctcc 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cagcatccacagagccaaaagctagaagctttctctgcaaactcctcttcatcaagctcc 245
Query: 160 aaagactcctccaaggattctgaggtggctgaagtctctaccatcagtgtttgttgctcc 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aaagactcctccaaggattctgaggtggctgaagtctctaccatcagtgtttgttgctcc 305
Query: 220 actccaaagggtcaaaagtttaagataccagaaatttcaacatgtccaccagcacctaag 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 actccaaagggtcaaaagtttaagataccagaaatttcaacatgtccaccagcacctaag 365
Query: 280 aagccaagggtgctctcaaatcgctctttgagaagatcacctttggcnnnnnnngcacca 339
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 366 aagccaagggtgctctcaaatcgctctttgagaagatcacctttggctttttttgcacca 425
Query: 340 ctggacttggaggtcttcttcagtgttgcccttcgagacgttccggtttcatttgttcgt 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ctggacttggaggtcttcttcagtgttgcccttcgagacgttccggtttcatttgttcgt 485
Query: 400 gtttga 405
||||||
Sbjct: 486 gtttga 491
>gnl|LJGI|TC79166 similar to UniRef100_A7NZQ4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 1502
Score = 93.7 bits (47), Expect = 8e-19
Identities = 86/99 (86%)
Strand = Plus / Plus
Query: 211 tgttgctccactccaaagggtcaaaagtttaagataccagaaatttcaacatgtccacca 270
||||| ||||| ||||| ||||| || |||| |||||| || ||||||||||| || |||
Sbjct: 850 tgttgttccacaccaaaaggtcagaaatttaggatacctgagatttcaacatgccctcca 909
Query: 271 gcacctaagaagccaagggtgctctcaaatcgctctttg 309
||||| ||||||||||||||||| |||||| ||||||||
Sbjct: 910 gcaccaaagaagccaagggtgctttcaaattgctctttg 948