Miyakogusa Predicted Gene
- Lj2g3v3336090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3336090.1 Non Chatacterized Hit- tr|I1KYS9|I1KYS9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,65.2,0,NFYA_HAP2_1,CCAAT-binding factor, conserved site;
CCAATSUBUNTB,CCAAT-binding transcription factor, s,CUFF.40027.1
(786 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011753 similar to UniRef100_A7NZQ3 Cluster: Chromosom... 208 4e-53
gnl|LJGI|DC594009 weakly similar to UniRef100_A7NZQ3 Cluster: Ch... 182 2e-45
gnl|LJGI|TC62428 similar to UniRef100_A5PGU7 Cluster: YA4; n=1; ... 86 4e-16
>gnl|LJGI|GO011753 similar to UniRef100_A7NZQ3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 650
Score = 208 bits (105), Expect = 4e-53
Identities = 232/268 (86%), Gaps = 6/268 (2%)
Strand = Plus / Plus
Query: 208 tgtgcttcaaatccttatcaggatccgtattacgggggcatgatggcagcatacgcacac 267
|||||| ||||||| ||||||||||| || || ||||||||||||||||| || | |||
Sbjct: 384 tgtgctccaaatccctatcaggatccatactatgggggcatgatggcagcttatggtcac 443
Query: 268 cagcagttgggatatggtccttttatagcaatgcctcatcctagaatggccttgcccctt 327
||||||||||| || | ||||||||||| |||||||||| | |||||| | |||||||||
Sbjct: 444 cagcagttggggtacgctccttttataggaatgcctcatgccagaatgcctttgcccctt 503
Query: 328 gagatggctcaagagcctg-tttatgtgaatgccaaacaatacctaggaattctaagacg 386
||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| | ||
Sbjct: 504 gagatggctcaagagcctgttttatgtgaatgccaaacaataccaagg-attctacggcg 562
Query: 387 aagacaggctcgtgctaaggcagagcttgaaaagaagttgattaaagttagaaagccata 446
||||| |||| |||||| ||||||||||||| || | | ||| ||| ||||||||
Sbjct: 563 tagaca-gctcttgctaaagcagagcttgaaaggagct--aaaaaatctag-aagccata 618
Query: 447 tcttcatgaatctcggcatcagcatgct 474
||||||||||||||||||||||||||||
Sbjct: 619 tcttcatgaatctcggcatcagcatgct 646
>gnl|LJGI|DC594009 weakly similar to UniRef100_A7NZQ3 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 290
Score = 182 bits (92), Expect = 2e-45
Identities = 101/104 (97%)
Strand = Plus / Plus
Query: 1 atgtcaggggcaaatgcatccaattcatcctcacttgactgcgctaacagtgattcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 atgtcaggggcaaatgcatccaattcatcctcacttgactgcgctaacagtgattcttca 246
Query: 61 gaaaccggtgaagaccaatctttgtacaataatggggtgaatga 104
|||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 247 gaaaccggtgaacgccaatctttgtacaataatgggatgaatga 290
>gnl|LJGI|TC62428 similar to UniRef100_A5PGU7 Cluster: YA4; n=1; Petunia x
hybrida|Rep: YA4 - Petunia hybrida (Petunia), partial
(29%)
Length = 822
Score = 85.7 bits (43), Expect = 4e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 468 gcatgctctgagaagagcaaggggtagcggaggacgatttgcaaagaaaac 518
||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2 gcatgctatgagaagggcaaggggtagcggaggacgatttgcaaagaaaac 52
Score = 58.0 bits (29), Expect = 9e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 693 tggtagtggctcctaccataatcataatggttcgcaa 729
||||||||||||||||||||| ||||||||||||||
Sbjct: 239 tggtagtggctcctaccataacaataatggttcgcaa 275
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 551 catcacagtcaattagttcatctggttctgaacctttaccttc 593
||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 109 catcacagtcaattagtagttctggttccgaacctttaccttc 151