Miyakogusa Predicted Gene

Lj2g3v3324920.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3324920.1 tr|B9MYJ9|B9MYJ9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_782416 PE=4
SV=1,41.34,7e-18,seg,NULL; coiled-coil,NULL,CUFF.40019.1
         (1227 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76044 homologue to UniRef100_A7PQJ5 Cluster: Chromoso...   922   0.0  

>gnl|LJGI|TC76044 homologue to UniRef100_A7PQJ5 Cluster: Chromosome chr6 scaffold_25,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_25, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (4%)
          Length = 727

 Score =  922 bits (465), Expect = 0.0
 Identities = 467/468 (99%)
 Strand = Plus / Plus

                                                                        
Query: 760  gtcgaacagggacaaactacaaatcaacagaagggaaaacctgggaaatcaccattttct 819
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14   gtcgaacagggacaaactacaaatcaacagaagggaaaacctgggaaatcaccattttct 73

                                                                        
Query: 820  acatcttcactcatgtttgcttcttgcagcctcatctccgtggttccatccaagctgcaa 879
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74   acatcttcactcatgtttgcttcttgcagcctcatctccgtggttccatccaagctgcaa 133

                                                                        
Query: 880  caatcattttcattctggaacaagggcagatcaaagccggagctggtttgttcgaggcac 939
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134  caatcattttcattctggaacaagggcagatcaaagccggagctggtttgttcnaggcac 193

                                                                        
Query: 940  actgatggcttcagcaatgtgaaaacagttgaatcagtcagtttccgcccggtgattggc 999
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194  actgatggcttcagcaatgtgaaaacagttgaatcagtcagtttccgcccggtgattggc 253

                                                                        
Query: 1000 ctgaagggtcggttgaaggccgtcggcataacacatgggagagtcagtgtaagaagctgt 1059
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254  ctgaagggtcggttgaaggccgtcggcataacacatgggagagtcagtgtaagaagctgt 313

                                                                        
Query: 1060 tcaggtgggaatcagactcgatcatgttcattggcttctgcagattcccataacaactta 1119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314  tcaggtgggaatcagactcgatcatgttcattggcttctgcagattcccataacaactta 373

                                                                        
Query: 1120 aagggaccaagagtgagtggtgacctgtggttgcatggggcacctgaaagggatttagac 1179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374  aagggaccaagagtgagtggtgacctgtggttgcatggggcacctgaaagggatttagac 433

                                                            
Query: 1180 agcatactgtctatgcattcctctacgtacaattttgaaacaacatag 1227
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434  agcatactgtctatgcattcctctacgtacaattttgaaacaacatag 481