Miyakogusa Predicted Gene

Lj2g3v3319010.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3319010.1 gene.g44558.t1.1
         (684 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS356769 similar to UniRef100_UPI00006A1640 Cluster: Hi...   541   e-153

>gnl|LJGI|FS356769 similar to UniRef100_UPI00006A1640 Cluster: Histone H1.5 (Histone
           H1a).; n=1; Xenopus tropicalis|Rep: Histone H1.5
           (Histone H1a). - Xenopus tropicalis, partial (9%)
          Length = 657

 Score =  541 bits (273), Expect = e-153
 Identities = 273/273 (100%)
 Strand = Plus / Minus

                                                                       
Query: 412 cggagacccagaggcaggccaaagaagaccgaggctaagggaagcatgaaggttccgccg 471
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 cggagacccagaggcaggccaaagaagaccgaggctaagggaagcatgaaggttccgccg 598

                                                                       
Query: 472 gtgactatggccgatgcagcgaccaatggtgaggaggtgtcaaccggaaaagagctgatg 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gtgactatggccgatgcagcgaccaatggtgaggaggtgtcaaccggaaaagagctgatg 538

                                                                       
Query: 532 gttctctctaaggagctctctaatccctatagcgtaatgacgcatgcaagaagtgctatc 591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gttctctctaaggagctctctaatccctatagcgtaatgacgcatgcaagaagtgctatc 478

                                                                       
Query: 592 ttgatggggaagcggcttgggatgacgtacgactgcccagacttcatagctgaaggtgag 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ttgatggggaagcggcttgggatgacgtacgactgcccagacttcatagctgaaggtgag 418

                                            
Query: 652 atcgcgacacaaattttggctagaagggtttga 684
           |||||||||||||||||||||||||||||||||
Sbjct: 417 atcgcgacacaaattttggctagaagggtttga 385