Miyakogusa Predicted Gene
- Lj2g3v3317710.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3317710.2 Non Chatacterized Hit- tr|I1QRT8|I1QRT8_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,84.38,0,G-patch,G-patch domain; glycine rich nucleic binding
domain,G-patch domain; G_PATCH,G-patch domain; ,CUFF.40035.2
(477 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58661 similar to UniRef100_A7QWV9 Cluster: Chromosome... 599 e-171
gnl|LJGI|TC75053 homologue to UniRef100_Q6ENK8 Cluster: Splicing... 283 5e-76
>gnl|LJGI|TC58661 similar to UniRef100_A7QWV9 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 796
Score = 599 bits (302), Expect = e-171
Identities = 302/302 (100%)
Strand = Plus / Plus
Query: 1 atggagttctacatgaagaaagctgcacgggaagaaaggtcaaaacaacctaagcagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atggagttctacatgaagaaagctgcacgggaagaaaggtcaaaacaacctaagcagtca 554
Query: 61 aaagatgagatgccccctcctgcttctcttcaagggaagaaaggccatcatatgggtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aaagatgagatgccccctcctgcttctcttcaagggaagaaaggccatcatatgggtgat 614
Query: 121 tatattccccttgaagaacttgagaagttcatggctagctgtaatgatgctggagcacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tatattccccttgaagaacttgagaagttcatggctagctgtaatgatgctggagcacag 674
Query: 181 aaagttttgaaggagactgcagagaaggccaaaatccaggcggataatgtgggccacaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aaagttttgaaggagactgcagagaaggccaaaatccaggcggataatgtgggccacaag 734
Query: 241 cttctatcaaaaatgggttggaaagaaggtgagggtttaggcggctccaggaagggtatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 cttctatcaaaaatgggttggaaagaaggtgagggtttaggcggctccaggaagggtatt 794
Query: 301 tc 302
||
Sbjct: 795 tc 796
>gnl|LJGI|TC75053 homologue to UniRef100_Q6ENK8 Cluster: Splicing factor 4-like
protein; n=2; Oryza sativa Japonica Group|Rep: Splicing
factor 4-like protein - Oryza sativa subsp. japonica
(Rice), partial (17%)
Length = 502
Score = 283 bits (143), Expect = 5e-76
Identities = 149/151 (98%)
Strand = Plus / Plus
Query: 327 taagaaagatcacttgggagtaggtgctgtccaacctggggaggtgacttctgaagatga 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taagaaagatcacttgggagtaggtgctgtccaacctggggaggtgacttctgaagatga 60
Query: 387 catatatgagcagtacaaaaagcgcatgatgcttggctaccgtcacagacccaatcctct 446
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catatatgaccagtaccaaaagcgcatgatgcttggctaccgtcacagacccaatcctct 120
Query: 447 gaacaatcctcgcaaggcgtattactgaaca 477
|||||||||||||||||||||||||||||||
Sbjct: 121 gaacaatcctcgcaaggcgtattactgaaca 151