Miyakogusa Predicted Gene
- Lj2g3v3303520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3303520.1 CUFF.39962.1
(1155 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81468 similar to UniRef100_A7Q9C7 Cluster: Chromosome... 1727 0.0
gnl|LJGI|BP080154 similar to UniRef100_A7Q9C7 Cluster: Chromosom... 579 e-164
gnl|LJGI|DC599429 similar to UniRef100_A7Q9C7 Cluster: Chromosom... 240 2e-62
gnl|LJGI|AV774541 54 2e-06
>gnl|LJGI|TC81468 similar to UniRef100_A7Q9C7 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 912
Score = 1727 bits (871), Expect = 0.0
Identities = 891/900 (99%)
Strand = Plus / Plus
Query: 1 atggggtggttggattccctgtttggggaaggacgaaaggttattaaaaggaaggacagt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 10 atggggtggttggattccctgtttggggaaggacgaaaagttattaaaaggaaggacagt 69
Query: 61 gatgctggagaagcaggtagagcactggaggagataagaggttctttgtacaatgagctc 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 70 gatgctggagaagcaggtagagcactggaggagatgagaggttctttgtacaatgagctc 129
Query: 121 cggacctcagaaggagccaagcgccaacaacaaagatactgtggaccaacggtggcattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cggacctcagaaggagccaagcgccaacaacaaagatactgtggaccaacggtggcattg 189
Query: 181 accttcaacttcatggttgcagttgggattatcatggcaaacaaattggtaatgggaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 accttcaacttcatggttgcagttgggattatcatggcaaacaaattggtaatgggaaaa 249
Query: 241 gttggcttcaacttcccaattttcctcacatttgttcactacatcaccgcatggcttcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gttggcttcaacttcccaattttcctcacatttgttcactacatcaccgcatggcttcta 309
Query: 301 cttgccattttcaaggcactcgcggtgcttcccgtctctcctccatctaaaacaactcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cttgccattttcaaggcactcgcggtgcttcccgtctctcctccatctaaaacaactcca 369
Query: 361 ttttcttctatatttgcacttggagctgttatggcttttgcatctggccttgcaaacaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttttcttctatatttgcacttggagctgttatggcttttgcatctggccttgcaaacaca 429
Query: 421 agcctcaagtataacagtgttggtttctaccaaatggctaagattgctgttaccccaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agcctcaagtataacagtgttggtttctaccaaatggctaagattgctgttaccccaaca 489
Query: 481 attgttctagcagagttcattctttttgggaaaaccatttcttttaaaaaggttttggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 attgttctagcagagttcattctttttgggaaaaccatttcttttaaaaaggttttggct 549
Query: 541 ttggctgtggtatcagcaggtgtagcagttgcaactgtgacagatttagagttcaannnn 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ttggctgtggtatcagcaggtgtagcagttgcaactgtgacagatttagagttcaatttt 609
Query: 601 nnnggtgctatagttgcagttatatggataatcccaagtgccataaacaagattttatgg 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tttggtgctatagttgcagttatatggataatcccaagtgccataaacaagattttatgg 669
Query: 661 tctaccttgcaacaacaaggcaattggacagctctcgcattgatgtggaagaccacacca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tctaccttgcaacaacaaggcaattggacagctctcgcattgatgtggaagaccacacca 729
Query: 721 atcacagttttcttcctagtggcattgatgccatggatagatccaccaggaatcttatcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 atcacagttttcttcctagtggcattgatgccatggatagatccaccaggaatcttatcc 789
Query: 781 ttcaagtgggatgtaaacaactcaactaccattatggtatctgctctccttggttttctc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ttcaagtgggatgtaaacaactcaactaccattatggtatctgctctccttggttttctc 849
Query: 841 ttacagtggtctggtgccttggcattgggggctacttctgctacaacccatgttgtttta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 ttacagtggtctggtgccttggcattgggggctacttctgctacaacccatgttgtttta 909
>gnl|LJGI|BP080154 similar to UniRef100_A7Q9C7 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 328
Score = 579 bits (292), Expect = e-164
Identities = 292/292 (100%)
Strand = Plus / Minus
Query: 864 attgggggctacttctgctacaacccatgttgttttaggacagtttaagacttgtgtcat 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 attgggggctacttctgctacaacccatgttgttttaggacagtttaagacttgtgtcat 269
Query: 924 tctgctgggaggctatctattattcaagtcagatcctggggttataagcataagtggagc 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tctgctgggaggctatctattattcaagtcagatcctggggttataagcataagtggagc 209
Query: 984 tgttgttgctctctctggaatgtcaatttacacaacattaaacctgcaagagtctcagga 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tgttgttgctctctctggaatgtcaatttacacaacattaaacctgcaagagtctcagga 149
Query: 1044 aagtacaagcaagcagcttccaaagcaagtttcaccacctccccaaaagcctaaatcagc 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aagtacaagcaagcagcttccaaagcaagtttcaccacctccccaaaagcctaaatcagc 89
Query: 1104 taatgaagacagtgaagatttgaatgtaaatattacttccgttgttgtctga 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 taatgaagacagtgaagatttgaatgtaaatattacttccgttgttgtctga 37
>gnl|LJGI|DC599429 similar to UniRef100_A7Q9C7 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 466
Score = 240 bits (121), Expect = 2e-62
Identities = 126/128 (98%)
Strand = Plus / Plus
Query: 1 atggggtggttggattccctgtttggggaaggacgaaaggttattaaaaggaaggacagt 60
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 339 atggggtggttggattccctgtttggggaaggacgaaaagttattanaaggaaggacagt 398
Query: 61 gatgctggagaagcaggtagagcactggaggagataagaggttctttgtacaatgagctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gatgctggagaagcaggtagagcactggaggagataagaggttctttgtacaatgagctc 458
Query: 121 cggacctc 128
||||||||
Sbjct: 459 cggacctc 466
>gnl|LJGI|AV774541
Length = 460
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 438 tgttggtttctaccaaatggctaagattgctgttacccc 476
||||||||||||| ||||||||||||||| || ||||||
Sbjct: 60 tgttggtttctactaaatggctaagattgttggtacccc 22