Miyakogusa Predicted Gene

Lj2g3v3261180.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3261180.1 Non Chatacterized Hit- tr|G7K4M4|G7K4M4_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,37.79,3e-18,coiled-coil,NULL; seg,NULL,CUFF.39942.1
         (1380 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO006066 homologue to UniRef100_P18709 Cluster: Vitello...   192   4e-48
gnl|LJGI|BI420048 UniRef100_Q0EEA3 Cluster: Major surface antige...    80   4e-14

>gnl|LJGI|GO006066 homologue to UniRef100_P18709 Cluster: Vitellogenin-A2 precursor (VTG
            A2) [Contains: Lipovitellin I; Lipovitellin II;
            Phosvitin];, partial (0%)
          Length = 497

 Score =  192 bits (97), Expect = 4e-48
 Identities = 177/203 (87%), Gaps = 3/203 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1178 ccctttctggaattacaattaagaatgagcctcaaagtttgcccggggaagtccaccagc 1237
            ||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||| |  
Sbjct: 4    ccctttctggaattacaattaagcatgagcctcaaagtttgtccggacaagtccacaaa- 62

                                                                        
Query: 1238 agaaaagcactcttgcatctggattgctcaaaagaaaaatgttcttttctgattcctctt 1297
              |||  ||||| ||||| ||||||||||||||||||| ||  |||||||||||||||||
Sbjct: 63   --aaatacactcctgcatttggattgctcaaaagaaaactgcccttttctgattcctctt 120

                                                                        
Query: 1298 ccagccctagttcttctgaagacaaatttgatgttgatagtcttccaattagttctgtac 1357
            | ||||||||||||||||||||| |||| |||||||| ||||||||||  |||| ||| |
Sbjct: 121  ctagccctagttcttctgaagacgaattagatgttgaaagtcttccaaaaagttttgttc 180

                                   
Query: 1358 ttaagaagagaagtaaaacttag 1380
            |||  ||||||||||||||||||
Sbjct: 181  ttagcaagagaagtaaaacttag 203


>gnl|LJGI|BI420048 UniRef100_Q0EEA3 Cluster: Major surface antigen; n=1; Hepatitis B
           virus|Rep: Major surface antigen - Hepatitis B virus
           (HBV), partial (8%)
          Length = 584

 Score = 79.8 bits (40), Expect = 4e-14
 Identities = 118/144 (81%)
 Strand = Plus / Plus

                                                                       
Query: 37  tccccacccgcgttcgcttcaaccagctctagaaacctcaaggacatgaccatttccgag 96
           ||||||||||  |||||||| |||||| | ||||||||||  ||||||| | |||| |||
Sbjct: 179 tccccacccgttttcgcttctaccagccccagaaacctcagagacatgagcgtttcggag 238

                                                                       
Query: 97  ctggttacagtgttgcgtgctgcgtaccagacggaggattttgatgtcgttgaggaggtt 156
           |||||| | ||||||||  ||||||  | | ||||||||| ||||   || |||||||||
Sbjct: 239 ctggttgcggtgttgcgccctgcgtttcgggcggaggattatgataaggtcgaggaggtt 298

                                   
Query: 157 ctggagagcagatacgcgaagctc 180
           ||||||||||  |||| |||||||
Sbjct: 299 ctggagagcaagtacgagaagctc 322