Miyakogusa Predicted Gene

Lj2g3v3260160.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3260160.1 tr|Q2HTB8|Q2HTB8_MEDTR Harpin-induced 1
OS=Medicago truncatula GN=MTR_7g118270 PE=4
SV=1,57.47,0.000000000001,seg,NULL,
NODE_48089_length_1057_cov_104.220436.path2.1
         (307 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58562 similar to UniRef100_Q2HTB8 Cluster: Harpin-ind...   373   e-103

>gnl|LJGI|TC58562 similar to UniRef100_Q2HTB8 Cluster: Harpin-induced 1; n=1;
           Medicago truncatula|Rep: Harpin-induced 1 - Medicago
           truncatula (Barrel medic), partial (80%)
          Length = 1081

 Score =  373 bits (188), Expect = e-103
 Identities = 230/250 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagaagacccaaaccccccaaagggccaaaaccaacatcaccatcttccccctccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atggaagaagacccaaaccccccaaagggccaaaaccaacatcaccatcttccccctccc 251

                                                                       
Query: 61  aacaagatacaaatgaacaatcacaaagcttctccttctccctacnnnnnnnnnnnnnnn 120
           |||||||||||||||||||||||||||||||||||||||||||||               
Sbjct: 252 aacaagatacaaatgaacaatcacaaagcttctccttctccctacggtggtggtggtggt 311

                                                                       
Query: 121 nnntcttctcccaaacgtgcagcctgcaccttcatcaccgtctttcttctagccgttgga 180
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggttcttctcccaaacgtgcagcctgcaccttcatcaccgtctttcttctagccgttgga 371

                                                                       
Query: 181 atcactctgctcgtcctctggctcgtctaccgtccccacaagccccgcttcacggcggtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 372 atcactctgctcgtcctctggctcgtctaccgtccccacaagccccgcttcacggtggtc 431

                     
Query: 241 ggcgccgccg 250
           ||||| ||||
Sbjct: 432 ggcgctgccg 441



 Score =  109 bits (55), Expect = 1e-23
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                  
Query: 253 gcagttcaacgtcctcataagaaaccccaacaagcgtgtctctatttactatgac 307
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gcagttcaacgtcctcataagaaaccccaacaagcgtgtctctatttactatgac 542