Miyakogusa Predicted Gene
- Lj2g3v3249980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3249980.1 Non Chatacterized Hit- tr|I3SPP4|I3SPP4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,76.92,6e-17,SBT
domain,Transcription factor, SBP-box; coiled-coil,NULL;
SBP,Transcription factor, SBP-box; no de,gene.g44494.t1.1
(570 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO026435 similar to UniRef100_A7QPU0 Cluster: Chromosom... 293 6e-79
gnl|LJGI|CN825561 similar to UniRef100_A7QPU0 Cluster: Chromosom... 293 6e-79
gnl|LJGI|TC60868 similar to UniRef100_A7QPU0 Cluster: Chromosome... 96 3e-19
gnl|LJGI|AW719611 similar to UniRef100_Q6C0E7 Cluster: Yarrowia ... 92 4e-18
gnl|LJGI|BP036639 weakly similar to UniRef100_Q989W7 Cluster: AB... 72 4e-12
gnl|LJGI|TC80533 UniRef100_A9TQX7 Cluster: Predicted protein; n=... 66 3e-10
gnl|LJGI|TC80259 66 3e-10
gnl|LJGI|AV768179 similar to UniRef100_Q8DJC2 Cluster: Tsr1305 p... 64 1e-09
gnl|LJGI|BP035501 56 2e-07
gnl|LJGI|TC82636 56 2e-07
gnl|LJGI|GO039995 similar to UniRef100_Q9KD01 Cluster: BH1418 pr... 54 1e-06
gnl|LJGI|TC76592 similar to UniRef100_A9RBP5 Cluster: Predicted ... 54 1e-06
gnl|LJGI|GO017116 similar to UniRef100_Q5P2Z1 Cluster: Disulfide... 52 4e-06
gnl|LJGI|BP085486 52 4e-06
>gnl|LJGI|GO026435 similar to UniRef100_A7QPU0 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 528
Score = 293 bits (148), Expect = 6e-79
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 423 agattccatgagctatcagaatttgatgactctaaaaggagttgtaggaggcgtctggct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 agattccatgagctatcagaatttgatgactctaaaaggagttgtaggaggcgtctggct 294
Query: 483 gggcataatgagaggcgtcgcaaaaatgcaattgactatcatggacaatgatttcatcaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gggcataatgagaggcgtcgcaaaaatgcaattgactatcatggacaatgatttcatcaa 354
Query: 543 tgagatgggcattgaggcaagcatataa 570
||||||||||||||||||||||||||||
Sbjct: 355 tgagatgggcattgaggcaagcatataa 382
Score = 168 bits (85), Expect = 2e-41
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 285 tggaagctcagtgccaccttcttgtcaggtggaaaattgtgatgctgatctaagtgaggc 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tggaagctcagtgccaccttcttgtcaggtggaaaattgtgatgctgatctaagtgaggc 134
Query: 345 taagcagtaccaccggcggcataaggttt 373
||||| |||||||||||||||||||||||
Sbjct: 135 taagcggtaccaccggcggcataaggttt 163
>gnl|LJGI|CN825561 similar to UniRef100_A7QPU0 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 628
Score = 293 bits (148), Expect = 6e-79
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 423 agattccatgagctatcagaatttgatgactctaaaaggagttgtaggaggcgtctggct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 agattccatgagctatcagaatttgatgactctaaaaggagttgtaggaggcgtctggct 406
Query: 483 gggcataatgagaggcgtcgcaaaaatgcaattgactatcatggacaatgatttcatcaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gggcataatgagaggcgtcgcaaaaatgcaattgactatcatggacaatgatttcatcaa 466
Query: 543 tgagatgggcattgaggcaagcatataa 570
||||||||||||||||||||||||||||
Sbjct: 467 tgagatgggcattgaggcaagcatataa 494
Score = 252 bits (127), Expect = 2e-66
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 247 gtagttacagatctatatagcaagagagggtctaaaggtggaagctcagtgccaccttct 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gtagttacagatctatatagcaagagagggtctaaaggtggaagctcagtgccaccttct 208
Query: 307 tgtcaggtggaaaattgtgatgctgatctaagtgaggctaagcagtaccaccggcggcat 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tgtcaggtggaaaattgtgatgctgatctaagtgaggctaagcagtaccaccggcggcat 268
Query: 367 aaggttt 373
|||||||
Sbjct: 269 aaggttt 275
>gnl|LJGI|TC60868 similar to UniRef100_A7QPU0 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 733
Score = 95.6 bits (48), Expect = 3e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 429 catgagctatcagaatttgatgactctaaaaggagttgtaggaggcgtctggctgggcat 488
||||| || ||||| ||||||||| | |||||||||||||| ||||| ||||||| |||
Sbjct: 425 catgaactgtcagagtttgatgacacaaaaaggagttgtagaaggcgcttggctggacat 484
Query: 489 aatgagaggcgtcgcaaaaatgca 512
||||||||||||||||||||||||
Sbjct: 485 aatgagaggcgtcgcaaaaatgca 508
Score = 65.9 bits (33), Expect = 3e-10
Identities = 98/119 (82%), Gaps = 3/119 (2%)
Strand = Plus / Plus
Query: 256 gatctatatagcaagagagggtctaaaggtggaagctcag---tgccaccttcttgtcag 312
|||||||| ||||||||||||| |||| ||| |||||| |||| ||||||||||||
Sbjct: 227 gatctatacagcaagagagggttcaaagccggaggctcagctgtgccgccttcttgtcag 286
Query: 313 gtggaaaattgtgatgctgatctaagtgaggctaagcagtaccaccggcggcataaggt 371
||||| ||| ||||||||||||| | |||||| ||||||||||||||| |||||
Sbjct: 287 gtggagggttgctatgctgatctaagcggcgctaaggcgtaccaccggcggcacaaggt 345
>gnl|LJGI|AW719611 similar to UniRef100_Q6C0E7 Cluster: Yarrowia lipolytica chromosome
F of strain CLIB122 of Yarrowia lipolytica; n=1;
Yarrowia lipolytica|Rep: Yarrowia lipolytica chromosome
F of strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica), partial (12%)
Length = 549
Score = 91.7 bits (46), Expect = 4e-18
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 368 aggttttcccaagggggttttatcctagtaaggttttaatgaggcc 413
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aggttttcccaagggggttttatcctagtaaggttttaatgaggcc 199
>gnl|LJGI|BP036639 weakly similar to UniRef100_Q989W7 Cluster: ABC transporter
permease protein; n=1; Mesorhizobium loti|Rep: ABC
transporter permease protein - Rhizobium loti
(Mesorhizobium loti), partial (4%)
Length = 473
Score = 71.9 bits (36), Expect = 4e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 368 aggttttcccaagggggttttatcctagtaaggttttaatgag 410
|||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 186 aggttttcccaaggggnttttttcctagtaaggttttaatgag 144
>gnl|LJGI|TC80533 UniRef100_A9TQX7 Cluster: Predicted protein; n=1; Physcomitrella
patens subsp. patens|Rep: Predicted protein -
Physcomitrella patens subsp. patens, partial (6%)
Length = 1273
Score = 65.9 bits (33), Expect = 3e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 368 aggttttcccaagggggttttatcctagtaaggttttaatgaggc 412
||||||||||||||||||||| |||| |||| |||||||||||||
Sbjct: 1112 aggttttcccaagggggttttttcctggtaaagttttaatgaggc 1156
>gnl|LJGI|TC80259
Length = 932
Score = 65.9 bits (33), Expect = 3e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 370 gttttcccaagggggttttatcctagtaaggttttaatgaggcct 414
||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 731 gttttcccaagggagttttctcctattaaggttttaatgaggcct 775
>gnl|LJGI|AV768179 similar to UniRef100_Q8DJC2 Cluster: Tsr1305 protein; n=1;
Synechococcus elongatus|Rep: Tsr1305 protein -
Synechococcus elongatus (Thermosynechococcus elongatus),
partial (15%)
Length = 352
Score = 63.9 bits (32), Expect = 1e-09
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 368 aggttttcccaagggggttttatcctagtaaggttttaatgaggcctgtttt 419
||||||||||||||||||||| |||| ||||||||||||| |||| ||||||
Sbjct: 229 aggttttcccaagggggtttt-tcctggtaaggttttaataaggcatgtttt 179
>gnl|LJGI|BP035501
Length = 519
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 368 aggttttcccaagggggttttatcctagtaaggttttaatgagg 411
|||||||||||||||||||||| ||| | | |||||||||||||
Sbjct: 196 aggttttcccaagggggttttaccctggaatggttttaatgagg 153
>gnl|LJGI|TC82636
Length = 1233
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 382 gggttttatcctagtaaggttttaatgaggcc 413
||||||| ||||||||||||||||||||||||
Sbjct: 1067 gggttttgtcctagtaaggttttaatgaggcc 1098
>gnl|LJGI|GO039995 similar to UniRef100_Q9KD01 Cluster: BH1418 protein; n=1; Bacillus
halodurans|Rep: BH1418 protein - Bacillus halodurans,
partial (6%)
Length = 722
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/42 (92%), Gaps = 2/42 (4%)
Strand = Plus / Plus
Query: 371 ttttcccaagggggttttatcctagtaaggttttaatgaggc 412
||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 16 ttttcccaaggggatttt--cctagtaaggttttaatgaggc 55
>gnl|LJGI|TC76592 similar to UniRef100_A9RBP5 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(16%)
Length = 652
Score = 54.0 bits (27), Expect = 1e-06
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 368 aggttttcccaagggggttttatcctagtaaggttttaatgag 410
|||||||||| | |||||||| |||||||||||||||||||||
Sbjct: 446 aggttttccccatggggtttt-tcctagtaaggttttaatgag 487
>gnl|LJGI|GO017116 similar to UniRef100_Q5P2Z1 Cluster: Disulfide bond formation
protein B; n=1; Azoarcus sp. EbN1|Rep: Disulfide bond
formation protein B - Azoarcus sp. (strain EbN1)
(Aromatoleum aromaticum (strain EbN1)), partial (8%)
Length = 666
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 369 ggttttcccaagggggttttatcctagtaaggttttaatgaggcct 414
||||||||||| |||||||| | |||| |||||||||||||||||
Sbjct: 121 ggttttcccaatggggtttttttctagagaggttttaatgaggcct 76
>gnl|LJGI|BP085486
Length = 285
Score = 52.0 bits (26), Expect = 4e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 370 gttttccca-agggggttttatcctagtaaggttttaatgaggcct 414
||||||||| |||| ||||| ||||| |||||||||||||||||||
Sbjct: 202 gttttcccacagggagttttctcctattaaggttttaatgaggcct 157