Miyakogusa Predicted Gene
- Lj2g3v3246900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3246900.1 Non Chatacterized Hit- tr|A2Z6T7|A2Z6T7_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,42.71,9e-17,RCC_reductase,Red chlorophyll catabolite reductase;
seg,NULL,CUFF.39939.1
(957 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67403 weakly similar to UniRef100_A7PL95 Cluster: Chr... 1542 0.0
gnl|LJGI|TC61467 weakly similar to UniRef100_A7PL95 Cluster: Chr... 1100 0.0
gnl|LJGI|FS330396 weakly similar to UniRef100_Q1ELT7 Cluster: Re... 428 e-119
>gnl|LJGI|TC67403 weakly similar to UniRef100_A7PL95 Cluster: Chromosome chr7
scaffold_20, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_20, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (69%)
Length = 1150
Score = 1542 bits (778), Expect = 0.0
Identities = 816/831 (98%)
Strand = Plus / Plus
Query: 127 gccatggagaccaatggccgcagcaaattcctggacttccccttcgtttcagctccccac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gccatggagaccaatggccgcagcaaattcctggacttccccttcgtttcagctccccac 192
Query: 187 aagaacctcatggttgatctcgtttcatcattcgagaatcgcttccactctcagcttctt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aagaacctcatggttgatctcgtttcatcattcgagaatcgcttccactctcagcttctt 252
Query: 247 ccttgctcacttccccctgatgttcagcattatcagagccagactggtgctgcccaggtt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ccttgctcacttccccctgatgttcagcattatcagagccagactggtgctgcccaggtt 312
Query: 307 tcactgcatatcagacctggtcacactgactccccaatagattttgtgttgggaagctgg 366
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tcattgcatatcagacctggtcacactgactccccaatagattttgtgttgggaagctgg 372
Query: 367 gtgcatgttgcgctgccaacaggaggatccttagacataacaagtctttcagcctatctc 426
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtgcatgctgcgctgccaacaggaggatccttagacataacaagtctttcagcctatctc 432
Query: 427 aacagttcaaatgatgcaccaaattttgtgtttgaactaatccgaagtagtccaactatg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aacagttcaaatgatgcaccaaattttgtgtttgaactaatccgaagtagtccaactatg 492
Query: 487 gtgattctcattcttgatttgcctcctcggaaagatcctgttctttggccagattacctc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtgattctcattcttgatttgcctcctcggaaagatcctgttctttggccagattacctc 552
Query: 547 aaaactttctatgaagacacaaaacttgacacacacaggcaggctctggagagagtgcca 606
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 553 aaaactttctatgaagacacaaaacttgacacacacaggcaggctctggagagagtgcta 612
Query: 607 gaggttcagtcttacttctcctcctccctttttatacgcaccgttgcatcccctacagct 666
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gaggttcagccttacttctcctcctccctttttatacgcaccgttgcatcccctacagct 672
Query: 667 atcatggttcgtattcagaccgaaaatggcggtgaagagcgaatggaggagatcatcaag 726
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 673 atcatggttcgtattcagactgaaaatggcgacgaagagcgaatggaggagatcatcaag 732
Query: 727 aaccatttggaccccatttcaaagcaagtgttagggatctggttggatcattgtgcttgt 786
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 aaccatctggaccccatttcaaagcaagtgttagggatctggttggatcattgtgcttgt 792
Query: 787 gccaagcgagaagtaggagaggaagacagagcttatctgnnnnnnngggatggtctcatt 846
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 793 gccaagcgagaagtaggagaggaagacagagcttatctgaaaaaaagggatggtctcatt 852
Query: 847 agaaacaagactatagaggttgatcttggttcaagctttccaaggttgtttggtccagaa 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 agaaacaagactatagaggttgatcttggttcaagctttccaaggttgtttggtccagaa 912
Query: 907 gcagcaaacagaatactggaagccatcaaggagtactttgctgtctgagat 957
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 gcagcaaacagaatactggaagccatcaaggagtactttgctgtctgagat 963
Score = 95.6 bits (48), Expect = 5e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1 atggaagtgatgatctctgcctgtcgcaatttcctacacacaccacca 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 atggaagtgatgatctctgcctgtcgcaatttcctacacacaccacca 66
>gnl|LJGI|TC61467 weakly similar to UniRef100_A7PL95 Cluster: Chromosome chr7
scaffold_20, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_20, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (56%)
Length = 736
Score = 1100 bits (555), Expect = 0.0
Identities = 589/595 (98%), Gaps = 4/595 (0%)
Strand = Plus / Plus
Query: 127 gccatggagaccaatggccgcagcaaattcctggacttccccttcgtttcagctccccac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gccatggagaccaatggccgcagcaaattcctggacttccccttcgtttcagctccccac 205
Query: 187 aagaacctcatggttgatctcgtttcatcattcgagaatcgcttccactctcagcttctt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aagaacctcatggttgatctcgtttcatcattcgagaatcgcttccactctcagcttctt 265
Query: 247 ccttgctcacttccccctgatgttcagcattatcagagccagactggtgctgcccaggtt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ccttgctcacttccccctgatgttcagcattatcagagccagactggtgctgcccaggtt 325
Query: 307 tcactgcatatcagacctggtcacactgactccccaatagattttgtgttgggaagctgg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tcactgcatatcagacctggtcacactgactccccaatagattttgtgttgggaagctgg 385
Query: 367 gtgcatgttgcgctgccaacaggaggatccttagacataacaagtctttcagcctatctc 426
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtgcatgctgcgctgccaacaggaggatccttagacataacaagtctttcagcctatctc 445
Query: 427 aacagttcaaatgatgcaccaaattttgtgtttgaactaatccgaagtagtccaactatg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aacagttcaaatgatgcaccaaattttgtgtttgaactaatccgaagtagtccaactatg 505
Query: 487 gtgattctcattcttgatttgcctcctcggaaagatcctgttctttggccagattacctc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gtgattctcattcttgatttgcctcctcggaaagatcctgttctttggccagattacctc 565
Query: 547 aaaactttctatgaagacacaaaacttgacacacacaggcaggctctggagagagtgcca 606
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 566 aaaactttctatgaagacaccaaacttgacacacacaggca-gctctggagagagtgcca 624
Query: 607 gaggttcagtcttacttctcctcctccctttttatacgcaccgttgcatcccctacagct 666
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 625 ga-gttcagtcttacttctcctcctccc-ttttatacgcaccgttgcatcccctacagct 682
Query: 667 atcatggttcgtattcagaccgaaaatggcggtgaagagcgaatggaggagatca 721
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 683 atcatggttcgtattcagaccgaaaatggcggtg-agagcgaatggaggagatca 736
Score = 95.6 bits (48), Expect = 5e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1 atggaagtgatgatctctgcctgtcgcaatttcctacacacaccacca 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 atggaagtgatgatctctgcctgtcgcaatttcctacacacaccacca 67
>gnl|LJGI|FS330396 weakly similar to UniRef100_Q1ELT7 Cluster: Red chlorophyll
catabolite reductase; n=1; Brassica napus|Rep: Red
chlorophyll catabolite reductase - Brassica napus
(Rape), partial (14%)
Length = 776
Score = 428 bits (216), Expect = e-119
Identities = 216/216 (100%)
Strand = Plus / Plus
Query: 127 gccatggagaccaatggccgcagcaaattcctggacttccccttcgtttcagctccccac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gccatggagaccaatggccgcagcaaattcctggacttccccttcgtttcagctccccac 207
Query: 187 aagaacctcatggttgatctcgtttcatcattcgagaatcgcttccactctcagcttctt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aagaacctcatggttgatctcgtttcatcattcgagaatcgcttccactctcagcttctt 267
Query: 247 ccttgctcacttccccctgatgttcagcattatcagagccagactggtgctgcccaggtt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ccttgctcacttccccctgatgttcagcattatcagagccagactggtgctgcccaggtt 327
Query: 307 tcactgcatatcagacctggtcacactgactcccca 342
||||||||||||||||||||||||||||||||||||
Sbjct: 328 tcactgcatatcagacctggtcacactgactcccca 363
Score = 87.7 bits (44), Expect = 1e-16
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 1 atggaagtgatgatctctgcctgtcgcaatttcctacacacaccacca 48
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atggaagagatgatctctgcctgtcgcaatttcctacacacaccacca 69