Miyakogusa Predicted Gene
- Lj2g3v3246890.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3246890.1 Non Chatacterized Hit- tr|I1M6J1|I1M6J1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50815
PE,72.83,0,GRAS,Transcription factor GRAS; FAMILY NOT
NAMED,NULL,CUFF.39938.1
(1368 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81247 1066 0.0
gnl|LJGI|TC67111 similar to UniRef100_Q0SNN8 Cluster: Flagellar ... 712 0.0
gnl|LJGI|TC71525 similar to UniRef100_A7P0E9 Cluster: Chromosome... 678 0.0
gnl|LJGI|AV414168 similar to UniRef100_A7P0E9 Cluster: Chromosom... 111 1e-23
gnl|LJGI|TC69040 similar to UniRef100_A7P0E9 Cluster: Chromosome... 103 3e-21
gnl|LJGI|TC80832 similar to UniRef100_A7P0E9 Cluster: Chromosome... 72 1e-11
gnl|LJGI|TC77796 similar to UniRef100_A7R429 Cluster: Chromosome... 60 4e-08
>gnl|LJGI|TC81247
Length = 905
Score = 1066 bits (538), Expect = 0.0
Identities = 558/562 (99%), Gaps = 2/562 (0%)
Strand = Plus / Plus
Query: 1 atgcaaacatctctgaaacataaaatgccatatggctccagcaggttcagcattgagcct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 atgcaaacatctctggaacataaaatgccatatggctccagcaggttcagcattgagcct 405
Query: 61 gagcaaaatctggagtcatttttcttcttgccaaatgagaacctagacaactactcatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gagcaaaatctggagtcatttttcttcttgccaaatgagaacctagacaactactcatcc 465
Query: 121 tctggtaacagtgttcttttttatgatttagaacaatattggacccctgaatcttcaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tctggtaacagtgttcttttttatgatttagaacaatattggacccctgaatcttcaata 525
Query: 181 aataacagttttcctggtcaaaattctccatctactgtcattttttcacctgaaaatagc 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 526 aataacagttttcctggtcaaaattctccatctactgtcatcttttcacctgaaaatagc 585
Query: 241 ccagtctcaaagctgaattccaaatctgatgtgttgaggtcagagcattctcttgaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ccagtctcaaagctgaattccaaatctgatgtgttgaggtcagagcattctcttgaaatt 645
Query: 301 attaacgattcgctagagaatgactcttgtgtgacacacaaccacaatgaacttagtctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 attaacgattcgctagagaatgactcttgtgtgacacacaaccacaatgaacttagtctc 705
Query: 361 aagataagagagcttgaaattgctatgctaggacatgatgcagatgttctggacatatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aagataagagagcttgaaattgctatgctaggacatgatgcagatgttctggacatatat 765
Query: 421 gatagtgtgattccagaagagtatgattcatcatttatgttagaggcagagaatttgaag 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 766 gatagtgtgattccagaagagtatgattcatcatttatgttagaggc-gagaatttgaag 824
Query: 481 acaatgatggagatggtagctagaggggacttgaaagagatgctttgcacttgtgcaaaa 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 825 acaatgatggagatggtagctagaggggacttgaaagagatgctttgcacttgtgc-aaa 883
Query: 541 gccatggaaaggaatgatgtgg 562
||||||||||||||||||||||
Sbjct: 884 gccatggaaaggaatgatgtgg 905
>gnl|LJGI|TC67111 similar to UniRef100_Q0SNN8 Cluster: Flagellar biosynthetic protein
fliR; n=1; Borrelia afzelii PKo|Rep: Flagellar
biosynthetic protein fliR - Borrelia afzelii (strain
PKo), partial (7%)
Length = 673
Score = 712 bits (359), Expect = 0.0
Identities = 359/359 (100%)
Strand = Plus / Plus
Query: 1 atgcaaacatctctgaaacataaaatgccatatggctccagcaggttcagcattgagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atgcaaacatctctgaaacataaaatgccatatggctccagcaggttcagcattgagcct 374
Query: 61 gagcaaaatctggagtcatttttcttcttgccaaatgagaacctagacaactactcatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gagcaaaatctggagtcatttttcttcttgccaaatgagaacctagacaactactcatcc 434
Query: 121 tctggtaacagtgttcttttttatgatttagaacaatattggacccctgaatcttcaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tctggtaacagtgttcttttttatgatttagaacaatattggacccctgaatcttcaata 494
Query: 181 aataacagttttcctggtcaaaattctccatctactgtcattttttcacctgaaaatagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aataacagttttcctggtcaaaattctccatctactgtcattttttcacctgaaaatagc 554
Query: 241 ccagtctcaaagctgaattccaaatctgatgtgttgaggtcagagcattctcttgaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ccagtctcaaagctgaattccaaatctgatgtgttgaggtcagagcattctcttgaaatt 614
Query: 301 attaacgattcgctagagaatgactcttgtgtgacacacaaccacaatgaacttagtct 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 attaacgattcgctagagaatgactcttgtgtgacacacaaccacaatgaacttagtct 673
>gnl|LJGI|TC71525 similar to UniRef100_A7P0E9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 906
Score = 678 bits (342), Expect = 0.0
Identities = 351/354 (99%)
Strand = Plus / Plus
Query: 1005 caaaattgcaaagtcttgtaatgttccatttgagttccatgctataggaacttctccttc 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaaattgcaaagtcttgtaatgttccatttgagttccatgctataggaacttctccttc 60
Query: 1065 tgaggtgcaacttcaagaccttgaaattagaccggaggaagctattgctgtgaattttgc 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaggtgcaacttcaagaccttgaaattagaccggaggaagctattgctgtgaattttgc 120
Query: 1125 catgatgctgcaccatgtgccagatgaaagtgtagacactcagaatcaaggatggagcca 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catgatgctgcaccatgtgccagatgaaagtgtagacactcagaatcaaggatggagcca 180
Query: 1185 gaatcaccgcaaccggttgttgagattggcaaagtgcttgtctcctaaggtagtgacact 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaatcaccgcaaccggttgttgagattggcaaagtgcttgtctcctaaggtagtgacact 240
Query: 1245 ggttgagcaagaatcaaacaccaataacctcccattcttgccgcgtttcgtcgagacaat 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggttgagcaagaatcaaacaccaataacctcccattcttgccgcgtttcgtcgagacaat 300
Query: 1305 gaactactacttgggagtttttgagtcaattgatgccgctcctcccagggagca 1358
|||||||||||||| |||||||||||||||||||||||||| ||| ||||||||
Sbjct: 301 gaactactacttggcagtttttgagtcaattgatgccgctcttccaagggagca 354
>gnl|LJGI|AV414168 similar to UniRef100_A7P0E9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 208
Score = 111 bits (56), Expect = 1e-23
Identities = 146/176 (82%)
Strand = Plus / Plus
Query: 773 tcaaatttgggtacatgtcagcaaatggtgtaattgcagaagctttgaatgatgaaagta 832
|||| ||||| || |||||||||||||| | |||||| |||||| |||| || |||||
Sbjct: 2 tcaagtttggatatatgtcagcaaatggagcaattgctgaagctatgaaggaggaaagag 61
Query: 833 aagtacacatcattgattttcaaattaaccagggaattcaatggcaaagcctaatccaag 892
|||| ||||| ||||| ||||| |||| |||||||| || ||| |||||||||||||
Sbjct: 62 aagtccacataattgactttcagattagccagggaacacagtgggtgagcctaatccaag 121
Query: 893 ctcttgctgaaagacctggaggaccaccaaagattagaataacaggtgttgatgac 948
|||||||| | |||| |||||||| |||||| | |||||||| ||||||||||||
Sbjct: 122 ctcttgctcaccgacccggaggaccgccaaaggtgagaataaccggtgttgatgac 177
>gnl|LJGI|TC69040 similar to UniRef100_A7P0E9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 806
Score = 103 bits (52), Expect = 3e-21
Identities = 133/160 (83%)
Strand = Plus / Plus
Query: 1180 agccagaatcaccgcaaccggttgttgagattggcaaagtgcttgtctcctaaggtagtg 1239
||||| |||||||| |||||||||||| |||||| ||||| |||||||| ||||||||
Sbjct: 65 agccataatcaccgggaccggttgttgaaattggctaagtgtttgtctccaaaggtagtc 124
Query: 1240 acactggttgagcaagaatcaaacaccaataacctcccattcttgccgcgtttcgtcgag 1299
|| ||||| ||||| |||| || || || ||| || ||||||| ||||||||| |||
Sbjct: 125 actctggtggagcaggaattcaatactaacaacgctccgttcttgcagcgtttcgttgag 184
Query: 1300 acaatgaactactacttgggagtttttgagtcaattgatg 1339
||||||||||||||| || |||||||| ||||||||||
Sbjct: 185 acaatgaactactaccaggctgtttttgaatcaattgatg 224
>gnl|LJGI|TC80832 similar to UniRef100_A7P0E9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 710
Score = 71.9 bits (36), Expect = 1e-11
Identities = 92/110 (83%), Gaps = 3/110 (2%)
Strand = Plus / Plus
Query: 147 tttagaacaatattggacccctgaatct---tcaataaataacagttttcctggtcaaaa 203
||||||||||||||| |||| ||||||| |||| || |||||||| ||| |||||
Sbjct: 427 tttagaacaatattgcacccatgaatctgcttcaacaagcaacagtttcccttaccaaaa 486
Query: 204 ttctccatctactgtcattttttcacctgaaaatagcccagtctcaaagc 253
||||||||||| ||||| ||||||| |||| || |||||||| |||||||
Sbjct: 487 ttctccatctaatgtcagtttttcatctgacaacagcccagtgtcaaagc 536
>gnl|LJGI|TC77796 similar to UniRef100_A7R429 Cluster: Chromosome undetermined
scaffold_610, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_610, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(55%)
Length = 1332
Score = 60.0 bits (30), Expect = 4e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 1199 ggttgttgagattggcaaagtgcttgtctcctaaggtagtgacactggttgagcaagaat 1258
||||||||||||||| ||| |||||||||| ||||| || || || | |||||||||||
Sbjct: 636 ggttgttgagattggttaagagcttgtctccaaaggttgttacccttgctgagcaagaat 695
Query: 1259 caaacaccaa 1268
| ||||||||
Sbjct: 696 ccaacaccaa 705