Miyakogusa Predicted Gene

Lj2g3v3224510.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3224510.1 tr|G7K4B8|G7K4B8_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,76.13,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR: pentatricopeptide repeat
domain,Pentatricopept,NODE_85661_length_3170_cov_7.877918.path1.1
         (2292 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73387 similar to UniRef100_A9S692 Cluster: Predicted ...    72   2e-11

>gnl|LJGI|TC73387 similar to UniRef100_A9S692 Cluster: Predicted protein; n=1;
            Physcomitrella patens subsp. patens|Rep: Predicted
            protein - Physcomitrella patens subsp. patens, partial
            (3%)
          Length = 647

 Score = 71.9 bits (36), Expect = 2e-11
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 1059 tgatgaggtggttaactattcgttgttgtttatgtactgcaagtttgg 1106
            |||||||||||||||| ||||||| ||||||||||||| |||||||||
Sbjct: 256  tgatgaggtggttaacaattcgttcttgtttatgtactacaagtttgg 209