Miyakogusa Predicted Gene

Lj2g3v3224260.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3224260.1 Non Chatacterized Hit- tr|A9NK26|A9NK26_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,64.29,4e-19,ATP_synt_H,ATPase, V0 complex, subunit E; VACUOLAR ATP
SYNTHASE SUBUNIT H,ATPase, V0 complex, subuni,CUFF.39895.1
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62524 similar to UniRef100_Q8GUB2 Cluster: Vacuolar A...   609   e-174
gnl|LJGI|TC64876 similar to UniRef100_Q8GUB2 Cluster: Vacuolar A...   168   1e-41

>gnl|LJGI|TC62524 similar to UniRef100_Q8GUB2 Cluster: Vacuolar ATPase subunit
           e-like; n=1; Mesembryanthemum crystallinum|Rep: Vacuolar
           ATPase subunit e-like - Mesembryanthemum crystallinum
           (Common ice plant), complete
          Length = 713

 Score =  609 bits (307), Expect = e-174
 Identities = 307/307 (100%)
 Strand = Plus / Plus

                                                                       
Query: 36  atcaccaattcaccatctccaattaggaattgaaatcgcaggaacactctcacttttctc 95
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   atcaccaattcaccatctccaattaggaattgaaatcgcaggaacactctcacttttctc 61

                                                                       
Query: 96  tccgatcaggatctggcaccagtccactgatatgggttttccggcaaccacgcttatctt 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  tccgatcaggatctggcaccagtccactgatatgggttttccggcaaccacgcttatctt 121

                                                                       
Query: 156 cgccgcgattggaatcgtcgcgtctctctgtaccgtaatttgcttcaacagaggatcttc 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgccgcgattggaatcgtcgcgtctctctgtaccgtaatttgcttcaacagaggatcttc 181

                                                                       
Query: 216 gtctaatctatttcacctaactttggttcttactgcaacaatatgctgctggatgatgtg 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtctaatctatttcacctaactttggttcttactgcaacaatatgctgctggatgatgtg 241

                                                                       
Query: 276 ggcaattgtatatctagcacagatgaaaccgctcatagttcctatcttgagtgaagcgga 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggcaattgtatatctagcacagatgaaaccgctcatagttcctatcttgagtgaagcgga 301

                  
Query: 336 ataactt 342
           |||||||
Sbjct: 302 ataactt 308


>gnl|LJGI|TC64876 similar to UniRef100_Q8GUB2 Cluster: Vacuolar ATPase subunit
           e-like; n=1; Mesembryanthemum crystallinum|Rep: Vacuolar
           ATPase subunit e-like - Mesembryanthemum crystallinum
           (Common ice plant), complete
          Length = 690

 Score =  168 bits (85), Expect = 1e-41
 Identities = 160/185 (86%)
 Strand = Plus / Plus

                                                                       
Query: 145 acgcttatcttcgccgcgattggaatcgtcgcgtctctctgtaccgtaatttgcttcaac 204
           ||||| |||||||| | |||||||||| |||| |  ||||| |||  |||||||| ||| 
Sbjct: 182 acgctaatcttcgcggtgattggaatcatcgcatgcctctgcaccagaatttgctgcaat 241

                                                                       
Query: 205 agaggatcttcgtctaatctatttcacctaactttggttcttactgcaacaatatgctgc 264
           |||||| ||||  | ||||| |||||  ||||||||||| ||||||||||||||||||||
Sbjct: 242 agaggaccttctaccaatctgtttcatttaactttggttattactgcaacaatatgctgc 301

                                                                       
Query: 265 tggatgatgtgggcaattgtatatctagcacagatgaaaccgctcatagttcctatcttg 324
           |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||  ||
Sbjct: 302 tggatgatgtgggcgattgtatacctagcacagatgaaaccgctcatagtacctatactg 361

                
Query: 325 agtga 329
           |||||
Sbjct: 362 agtga 366