Miyakogusa Predicted Gene
- Lj2g3v3224240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3224240.1 Non Chatacterized Hit- tr|F1A2U8|F1A2U8_DICPU
Putative uncharacterized protein OS=Dictyostelium
purp,30.59,9e-18,SYNTAXIN 51,NULL; SYNTAXIN,NULL; Helical region found
in SNAREs,Target SNARE coiled-coil domain; seg,CUFF.40009.1
(705 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59735 similar to UniRef100_Q94KK7 Cluster: Syntaxin-5... 1398 0.0
gnl|LJGI|BW605509 similar to UniRef100_Q45NJ2 Cluster: Syntaxin ... 799 0.0
gnl|LJGI|TC58482 similar to UniRef100_Q94KK7 Cluster: Syntaxin-5... 541 e-153
gnl|LJGI|TC61346 similar to UniRef100_Q94KK7 Cluster: Syntaxin-5... 529 e-150
gnl|LJGI|DC595380 similar to UniRef100_Q06H39 Cluster: Syntaxin;... 428 e-119
>gnl|LJGI|TC59735 similar to UniRef100_Q94KK7 Cluster: Syntaxin-52; n=1; Arabidopsis
thaliana|Rep: Syntaxin-52 - Arabidopsis thaliana
(Mouse-ear cress), complete
Length = 1187
Score = 1398 bits (705), Expect = 0.0
Identities = 705/705 (100%)
Strand = Plus / Plus
Query: 1 atggcatcttcttcagactcatgggtgaaggaatacaatgaagcagtgaaacttgctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 atggcatcttcttcagactcatgggtgaaggaatacaatgaagcagtgaaacttgctgat 225
Query: 61 gatatcagcaccatgatttccgagcggagttcgtctgtggaatctggaccggaagcccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gatatcagcaccatgatttccgagcggagttcgtctgtggaatctggaccggaagcccaa 285
Query: 121 cgtcattcatctgctataagaaggaagatcacaatattagggaccaggcttgatagcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 cgtcattcatctgctataagaaggaagatcacaatattagggaccaggcttgatagcttg 345
Query: 181 caatcccttttgtcaaagcttccagctgggaagcagcctgtatctgagaaggagctgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 caatcccttttgtcaaagcttccagctgggaagcagcctgtatctgagaaggagctgaat 405
Query: 241 cgtcgcaaggacatgcttgcaagtttgagatcaagagttaacgagatggcttccacgttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cgtcgcaaggacatgcttgcaagtttgagatcaagagttaacgagatggcttccacgttg 465
Query: 301 agcatgccaaatttttccaacagggatagtttgtttgggccagaaataaagccagatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agcatgccaaatttttccaacagggatagtttgtttgggccagaaataaagccagatgca 525
Query: 361 atgagtaggaccaatggcctggacaacaaaggagttattggacttcaacgacaaattatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 atgagtaggaccaatggcctggacaacaaaggagttattggacttcaacgacaaattatg 585
Query: 421 aaagaacaagatgagggccttgagaaattggaggaaagtgtaacaagcacaaaacatatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aaagaacaagatgagggccttgagaaattggaggaaagtgtaacaagcacaaaacatatt 645
Query: 481 gcattagctgtgaatgaagagctggatctacacacgagtctcattgatgacttggaccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gcattagctgtgaatgaagagctggatctacacacgagtctcattgatgacttggaccaa 705
Query: 541 catgtagatgtcacagattctcggcttaggcgtgtgcagaagaacttggcagttttaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 catgtagatgtcacagattctcggcttaggcgtgtgcagaagaacttggcagttttaaat 765
Query: 601 aaacgaaccaacggtggttgctcctgcttgtgcatgcttttatcagtgattggcatagtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 aaacgaaccaacggtggttgctcctgcttgtgcatgcttttatcagtgattggcatagtg 825
Query: 661 gttttggttgttgtcattgggctgttggtcaaatatctgtaatga 705
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gttttggttgttgtcattgggctgttggtcaaatatctgtaatga 870
>gnl|LJGI|BW605509 similar to UniRef100_Q45NJ2 Cluster: Syntaxin of plants; n=1;
Medicago sativa|Rep: Syntaxin of plants - Medicago
sativa (Alfalfa), partial (94%)
Length = 485
Score = 799 bits (403), Expect = 0.0
Identities = 403/403 (100%)
Strand = Plus / Plus
Query: 1 atggcatcttcttcagactcatgggtgaaggaatacaatgaagcagtgaaacttgctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atggcatcttcttcagactcatgggtgaaggaatacaatgaagcagtgaaacttgctgat 142
Query: 61 gatatcagcaccatgatttccgagcggagttcgtctgtggaatctggaccggaagcccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gatatcagcaccatgatttccgagcggagttcgtctgtggaatctggaccggaagcccaa 202
Query: 121 cgtcattcatctgctataagaaggaagatcacaatattagggaccaggcttgatagcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cgtcattcatctgctataagaaggaagatcacaatattagggaccaggcttgatagcttg 262
Query: 181 caatcccttttgtcaaagcttccagctgggaagcagcctgtatctgagaaggagctgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 caatcccttttgtcaaagcttccagctgggaagcagcctgtatctgagaaggagctgaat 322
Query: 241 cgtcgcaaggacatgcttgcaagtttgagatcaagagttaacgagatggcttccacgttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cgtcgcaaggacatgcttgcaagtttgagatcaagagttaacgagatggcttccacgttg 382
Query: 301 agcatgccaaatttttccaacagggatagtttgtttgggccagaaataaagccagatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agcatgccaaatttttccaacagggatagtttgtttgggccagaaataaagccagatgca 442
Query: 361 atgagtaggaccaatggcctggacaacaaaggagttattggac 403
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atgagtaggaccaatggcctggacaacaaaggagttattggac 485
>gnl|LJGI|TC58482 similar to UniRef100_Q94KK7 Cluster: Syntaxin-52; n=1; Arabidopsis
thaliana|Rep: Syntaxin-52 - Arabidopsis thaliana
(Mouse-ear cress), partial (98%)
Length = 957
Score = 541 bits (273), Expect = e-153
Identities = 589/695 (84%), Gaps = 12/695 (1%)
Strand = Plus / Plus
Query: 1 atggcatcttcttcagactcatgggtgaaggaatacaatgaagcagtgaaacttgctgat 60
|||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||| |||
Sbjct: 247 atggcatcttcttcagacacatggatgaaggaatataatgaagcaatgaaacttgccgat 306
Query: 61 gatatcagcaccatgatttccgagcggagttcgtctgtggaatctggaccggaagcccaa 120
||||||| || ||||||||| ||||||||||| | | | ||||||||| ||| ||||
Sbjct: 307 gatatcaacagcatgatttctgagcggagttcatttcctgcatctggaccagaaacccag 366
Query: 121 cgtcattcatctgctataagaaggaagatcacaatattagggaccaggcttgatagcttg 180
||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 367 cgtcacgcatctgctataagaaggaaaatcacaatattggggaccagacttgatagcttg 426
Query: 181 caatcccttttgtcaaagcttccagctgggaagcagcctgtatctgagaaggagctgaat 240
|||||||||||||||||||| || || ||| |||||||||||| |||||
Sbjct: 427 caatcccttttgtcaaagctccc---tgtaaag---------tctgagaaggagatgaat 474
Query: 241 cgtcgcaaggacatgcttgcaagtttgagatcaagagttaacgagatggcttccacgttg 300
||||||||||||| |||||||| |||||| |||| ||||||| | |||||||| || |||
Sbjct: 475 cgtcgcaaggacacgcttgcaaatttgaggtcaaaagttaaccaaatggcttcaacattg 534
Query: 301 agcatgccaaatttttccaacagggatagtttgtttgggccagaaataaagccagatgca 360
| |||| |||| ||| | || |||||||||||| |||||||||||||||| ||||||||
Sbjct: 535 aacatgtcaaactttgcaaatagggatagtttgcttgggccagaaataaaaccagatgcg 594
Query: 361 atgagtaggaccaatggcctggacaacaaaggagttattggacttcaacgacaaattatg 420
||||| || || || |||| |||| || | |||| |||||||| |||||||||
Sbjct: 595 atgagcagaactgtgggtttggataacagtgggctcgttggtcttcaacggcaaattatg 654
Query: 421 aaagaacaagatgagggccttgagaaattggaggaaagtgtaacaagcacaaaacatatt 480
||||| ||||| || |||||||||||||||||||| | ||||| ||| ||||||||||||
Sbjct: 655 aaagagcaagacgatggccttgagaaattggaggagactgtaataagtacaaaacatatt 714
Query: 481 gcattagctgtgaatgaagagctggatctacacacgagtctcattgatgacttggaccaa 540
|| || || ||||||||||||||| ||||||||| || ||||||||||||||||| ||
Sbjct: 715 gctttggcagtgaatgaagagctgactctacacactagactcattgatgacttggatgaa 774
Query: 541 catgtagatgtcacagattctcggcttaggcgtgtgcagaagaacttggcagttttaaat 600
|| |||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||
Sbjct: 775 cacgtagatgttacagattctcgtctgaggcgtgtgcagaagcacttggcagttttaaac 834
Query: 601 aaacgaaccaacggtggttgctcctgcttgtgcatgcttttatcagtgattggcatagtg 660
||||| ||||| |||||||||||||||||||||||||||||| ||||| |||| |||||
Sbjct: 835 aaacgtaccaagggtggttgctcctgcttgtgcatgcttttagcagtggttggtatagtt 894
Query: 661 gttttggttgttgtcattgggctgttggtcaaata 695
||||||| || ||||| |||| |||||||||||
Sbjct: 895 attttggtggtcgtcatatggctcttggtcaaata 929
>gnl|LJGI|TC61346 similar to UniRef100_Q94KK7 Cluster: Syntaxin-52; n=1; Arabidopsis
thaliana|Rep: Syntaxin-52 - Arabidopsis thaliana
(Mouse-ear cress), partial (97%)
Length = 1025
Score = 529 bits (267), Expect = e-150
Identities = 596/705 (84%), Gaps = 13/705 (1%)
Strand = Plus / Plus
Query: 1 atggcatcttcttcagactcatgggtgaaggaatacaatgaagcagtgaaacttgctgat 60
|||||||||||| ||||| ||||| |||||||||| ||||||||| |||||||||| |||
Sbjct: 31 atggcatcttct-cagacacatggatgaaggaatataatgaagcaatgaaacttgccgat 89
Query: 61 gatatcagcaccatgatttccgagcggagttcgtctgtggaatctggaccggaagcccaa 120
||||||| || ||||||||| ||||||||||| | | | ||||||||| ||| ||||
Sbjct: 90 gatatcaacagcatgatttctgagcggagttcatttcctgcatctggaccagaaacccag 149
Query: 121 cgtcattcatctgctataagaaggaagatcacaatattagggaccaggcttgatagcttg 180
||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 150 cgtcacgcatctgctataagaaggaaaatcacaatattggggaccagacttgatagcttg 209
Query: 181 caatcccttttgtcaaagcttccagctgggaagcagcctgtatctgagaaggagctgaat 240
|||||||||||||||||||| || || ||| |||||||||||| |||||
Sbjct: 210 caatcccttttgtcaaagctccc---tgtaaag---------tctgagaaggagatgaat 257
Query: 241 cgtcgcaaggacatgcttgcaagtttgagatcaagagttaacgagatggcttccacgttg 300
||||||||||||| |||||||| |||||| |||| ||||||| | |||||||| || |||
Sbjct: 258 cgtcgcaaggacacgcttgcaaatttgaggtcaaaagttaaccaaatggcttcaacattg 317
Query: 301 agcatgccaaatttttccaacagggatagtttgtttgggccagaaataaagccagatgca 360
| |||| |||| ||| | || |||||||||||| |||||||||||||||| ||||||||
Sbjct: 318 aacatgtcaaactttgcaaatagggatagtttgcttgggccagaaataaaaccagatgcg 377
Query: 361 atgagtaggaccaatggcctggacaacaaaggagttattggacttcaacgacaaattatg 420
||||| || || || |||| |||| || | |||| |||||||| |||||||||
Sbjct: 378 atgagcagaactgtgggtttggataacagtgggctcgttggtcttcaacggcaaattatg 437
Query: 421 aaagaacaagatgagggccttgagaaattggaggaaagtgtaacaagcacaaaacatatt 480
||||| ||||| || |||||||||||||||||||| | ||||| ||| ||||||||||||
Sbjct: 438 aaagagcaagacgatggccttgagaaattggaggagactgtaataagtacaaaacatatt 497
Query: 481 gcattagctgtgaatgaagagctggatctacacacgagtctcattgatgacttggaccaa 540
|| || || ||||||||||||||| ||||||||| || ||||||||||||||||| ||
Sbjct: 498 gctttggcagtgaatgaagagctgactctacacactagactcattgatgacttggatgaa 557
Query: 541 catgtagatgtcacagattctcggcttaggcgtgtgcagaagaacttggcagttttaaat 600
|| |||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||
Sbjct: 558 cacgtagatgttacagattctcgtctgaggcgtgtgcagaagcacttggcagttttaaac 617
Query: 601 aaacgaaccaacggtggttgctcctgcttgtgcatgcttttatcagtgattggcatagtg 660
||||| ||||| |||||||||||||||||||||||||||||| ||||| |||| |||||
Sbjct: 618 aaacgtaccaagggtggttgctcctgcttgtgcatgcttttagcagtggttggtatagtt 677
Query: 661 gttttggttgttgtcattgggctgttggtcaaatatctgtaatga 705
||||||| || ||||| |||| ||||||||||| ||||||||
Sbjct: 678 attttggtggtcgtcatatggctcttggtcaaatacttgtaatga 722
>gnl|LJGI|DC595380 similar to UniRef100_Q06H39 Cluster: Syntaxin; n=1; Arachis
hypogaea|Rep: Syntaxin - Arachis hypogaea (Peanut),
partial (38%)
Length = 377
Score = 428 bits (216), Expect = e-119
Identities = 231/236 (97%)
Strand = Plus / Plus
Query: 37 aatgaagcagtgaaacttgctgatgatatcagcaccatgatttccgagcggagttcgtct 96
||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 142 aatgaaggggtgaaacttgctgaggatatcaccaccatgatttccgagcggagttcgtct 201
Query: 97 gtggaatctggaccggaagcccaacgtcattcatctgctataagaaggaagatcacaata 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gtggaatctggaccggaagcccaacgtcattcatctgctataagaaggaagatcacaata 261
Query: 157 ttagggaccaggcttgatagcttgcaatcccttttgtcaaagcttccagctgggaagcag 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttagggaccaggcttgatagcttgcaatcccttttgtcaaagcttccagctgggaagcag 321
Query: 217 cctgtatctgagaaggagctgaatcgtcgcaaggacatgcttgcaagtttgagatc 272
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 322 cctgtatctgagaaggagctgaatcgtcgcaaggagatgcttgcaagtttgagatc 377