Miyakogusa Predicted Gene

Lj2g3v3224070.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3224070.1 tr|G7K498|G7K498_MEDTR Bactericidal
permeability-increasing protein OS=Medicago truncatula
GN=MTR_5g,74.58,9e-17,seg,NULL,
NODE_61630_length_204_cov_270.676483.path1.1
         (246 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78024 weakly similar to UniRef100_A7PXC2 Cluster: Chr...   412   e-115
gnl|LJGI|GO005416 weakly similar to UniRef100_A7PXC2 Cluster: Ch...   127   3e-29

>gnl|LJGI|TC78024 weakly similar to UniRef100_A7PXC2 Cluster: Chromosome chr12
           scaffold_36, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 812

 Score =  412 bits (208), Expect = e-115
 Identities = 241/250 (96%), Gaps = 4/250 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcacccagaattctttcct-ttcttatat---tgttgttcatttcaacttgtggcgg 56
           |||||||||||||||||||||| |||||||||   | ||||||||||||||||||||| |
Sbjct: 121 atggcacccagaattctttcctcttcttatatccctcttgttcatttcaacttgtggcag 180

                                                                       
Query: 57  tgtccagcataatgaagatgagggtttcatctctgtggtgatatctgataagggccttga 116
           |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtccaacataatgaagaggagggcttcatctctgtggtgatatctgataagggccttga 240

                                                                       
Query: 117 ttttgctaaggattttgtgatagacaaggctgttgcctctatagttcaatctcagctgcc 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttgctaaggattttgtgatagacaaggctgttgcctctatagttcaatctcagctgcc 300

                                                                       
Query: 177 agaaattgagaagactgtcaaagttccacttgttggaaaagctaacgtgattctttctga 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaaattgagaagactgtcaaagttccacttgttggaaaagctaacgtgattctttctga 360

                     
Query: 237 tatcacaatc 246
           ||||||||||
Sbjct: 361 tatcacaatc 370


>gnl|LJGI|GO005416 weakly similar to UniRef100_A7PXC2 Cluster: Chromosome chr12
           scaffold_36, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 764

 Score =  127 bits (64), Expect = 3e-29
 Identities = 142/168 (84%)
 Strand = Plus / Plus

                                                                       
Query: 79  ggtttcatctctgtggtgatatctgataagggccttgattttgctaaggattttgtgata 138
           ||||||||||||| ||| |||||||||||||| || |||||||| ||||||||  |||||
Sbjct: 313 ggtttcatctctggggtcatatctgataagggtctcgattttgcgaaggatttgctgata 372

                                                                       
Query: 139 gacaaggctgttgcctctatagttcaatctcagctgccagaaattgagaagactgtcaaa 198
           || || | | |||||||| | ||||    |||||||||||| ||||| ||  ||| ||||
Sbjct: 373 gagaaaggtattgcctctcttgttctgcttcagctgccagagattgaaaactctgccaaa 432

                                                           
Query: 199 gttccacttgttggaaaagctaacgtgattctttctgatatcacaatc 246
           || |||||||||||||| ||||| ||| ||||||||||||||||||||
Sbjct: 433 gtcccacttgttggaaatgctaaagtggttctttctgatatcacaatc 480