Miyakogusa Predicted Gene

Lj2g3v3222880.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3222880.1 tr|Q9LPT2|Q9LPT2_ARATH F11F12.6 protein
OS=Arabidopsis thaliana GN=F11F12.6 PE=4 SV=1,52.27,3e-17,PHD zinc
finger,Zinc finger, PHD-type; seg,NULL; FYVE/PHD zinc finger,Zinc
finger, FYVE/PHD-type; no,CUFF.39893.1
         (2985 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP033705                                                     192   9e-48

>gnl|LJGI|BP033705 
          Length = 471

 Score =  192 bits (97), Expect = 9e-48
 Identities = 111/118 (94%)
 Strand = Plus / Minus

                                                                        
Query: 2868 agaaaatgacaggcgatgtcagttagaaaatgagccaagtgctagagtacagcccatttt 2927
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471  agaaaatgacaggcgatgtcagttagaaaatgagccaagtgctagagtacagcccatttt 412

                                                                      
Query: 2928 cctttgcaggtggttttatgatgaaatcaaaagnnnnnnncaaccagttaccagttga 2985
            |||||||||||||||||||||||||||||||||       ||||||||||||||||||
Sbjct: 411  cctttgcaggtggttttatgatgaaatcaaaagtttttttcaaccagttaccagttga 354