Miyakogusa Predicted Gene
- Lj2g3v3220810.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3220810.2 Non Chatacterized Hit- tr|A5AEZ1|A5AEZ1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,27.98,2e-18,Mitochondrial termination factor repeats,Mitochodrial
transcription termination factor-related; mTER,CUFF.39885.2
(702 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chr... 660 0.0
gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Ch... 622 e-178
gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Ch... 168 3e-41
gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chr... 101 6e-21
>gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chromosome chr7
scaffold_31, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 1406
Score = 660 bits (333), Expect = 0.0
Identities = 598/689 (86%)
Strand = Plus / Plus
Query: 14 agaatcagataatacctacatttgaatttgtaaggagattttgtccatctcatgaaaaag 73
||||||| || |||||| ||||||||||||||||| || || | |||| |||||| ||
Sbjct: 508 agaatcacattatacctgtatttgaatttgtaaggacgttctgccaatctgatgaaagag 567
Query: 74 caatggcttgtgtagttactggttccagttgcattaatattgctcttatgaaatcaaaag 133
|||| ||||||||| | |||||||| | |||| ||||| || |||||||||||||
Sbjct: 568 caatcgcttgtgtactatttggttccaataccattgttattgatcgcatgaaatcaaaag 627
Query: 134 ttaaattgttgcttgatatgggagtgcctccctcaaacatataccttttgcttattacta 193
| |||||||||||| ||||||||||| ||||||||||||| ||| ||||||| ||||
Sbjct: 628 taaaattgttgcttaatatgggagtgactccctcaaacatccaccagttgcttactactt 687
Query: 194 ggccctctatgctcaaatgtgctcacttgaaggaggctgtggaggaagtcaagggattgg 253
|||||||| |||||||||||||| |||||| ||||||||||| |||||||||||||||||
Sbjct: 688 ggccctctgtgctcaaatgtgctgacttgacggaggctgtggtggaagtcaagggattgg 747
Query: 254 gattcaatccctcgaaaacgctttttgttgcagcattacaggccaaatgttctatatcca 313
|||| ||||||| ||| ||| ||||||| ||||||||| || |||| | ||||||||
Sbjct: 748 gatttcatccctccaaatcgcattttgtttcagcattacgggtcaaaaggggtatatcca 807
Query: 314 aatcactttgggatgccaaagtcgatgccttcaagacatggggctggtctgaagatacta 373
|||| | ||||||||||||| |||||||||| |||||||||||||| |||||||| |||
Sbjct: 808 aatcgccttgggatgccaaactcgatgcctttaagacatggggctgccctgaagatgcta 867
Query: 374 ttctggatgcatttaggagggatccccacattatgctaaactccatcggaaaagtaaatg 433
|||||||||||||||||||| |||||||||| |||||| |||| ||| |||||| ||||
Sbjct: 868 ttctggatgcatttaggaggtatccccacatgatgctatactcaatcaaaaaagttaatg 927
Query: 434 cagtgatgagtttttgggtcggccatcttggttgggacccttcagtgcttcaagctgtgc 493
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||
Sbjct: 928 cagtgatgagtttttgggtcgtccatcttggttgggacccttcagtgcttctagccgtgc 987
Query: 494 caacactttttggatatagtttggagaaaaggcttatgccaagggcttcagttgtccagt 553
||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 988 caacacttttttcattaagtttggagaaaaggcttatcccaagggcttcagttgtccagt 1047
Query: 554 atcttctctccagaggtttgatgaagaaggatgctagcttaagtagaccnnnnnnnnata 613
|||||||||||||||| |||||||||||||||||||||||||||| ||| ||
Sbjct: 1048 atcttctctccagaggattgatgaagaaggatgctagcttaagtacaccatttatatgta 1107
Query: 614 gtgataagttgttcctgcaaaaatatgtgaattgttttgaggaggaggaaacatctaagc 673
||| ||| |||||| |||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 1108 ctgacaagctgttccagcaaaaatttgtgaattgttttgaggaggaggaagcatctaagc 1167
Query: 674 tactaagtctatatcatggaggatgctag 702
||||||||||||||| |||||| |||||
Sbjct: 1168 tactaagtctatatcggggaggaagctag 1196
>gnl|LJGI|GO024260 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 544
Score = 622 bits (314), Expect = e-178
Identities = 437/478 (91%)
Strand = Plus / Plus
Query: 121 atgaaatcaaaagttaaattgttgcttgatatgggagtgcctccctcaaacatatacctt 180
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 16 atgaaatcaaaagtaaaattgttgcttcatatgggagtgcctccctcaaacatatacctt 75
Query: 181 ttgcttattactaggccctctatgctcaaatgtgctcacttgaaggaggctgtggaggaa 240
||||||| ||||||||| |||| |||| ||||||| ||||||| |||||||||||||||
Sbjct: 76 ttgcttagaactaggcccactatactcagatgtgctgacttgaacgaggctgtggaggaa 135
Query: 241 gtcaagggattgggattcaatccctcgaaaacgctttttgttgcagcattacaggccaaa 300
||||||||||||||||| ||||||| ||| ||| |||||||| ||| ||||||||||||
Sbjct: 136 gtcaagggattgggatttcatccctccaaatcgcattttgttgtagcgttacaggccaaa 195
Query: 301 tgttctatatccaaatcactttgggatgccaaagtcgatgccttcaagacatggggctgg 360
| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 196 aggggtatatccaaatcactttgggatgccaaagtcgatgcctttaagacatgtggctgg 255
Query: 361 tctgaagatactattctggatgcatttaggagggatccccacattatgctaaactccatc 420
||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| |||
Sbjct: 256 tctgaagatgctattttggatgcatttaggaggaatccccacattatgctatgctcaatc 315
Query: 421 ggaaaagtaaatgcagtgatgagtttttgggtcggccatcttggttgggacccttcagtg 480
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 316 aaaaaagttaatgcagtgatgagtttttgggtcggccgtcttggttgggacccttcagtg 375
Query: 481 cttcaagctgtgccaacactttttggatatagtttggagaaaaggcttatgccaagggct 540
|||| ||| |||||| |||||||| || |||||||||||||||||||| |||||||||
Sbjct: 376 cttctagccgtgccatcacttttttcattaagtttggagaaaaggcttatcccaagggct 435
Query: 541 tcagttgtccagtatcttctctccagaggtttgatgaagaaggatgctagcttaagta 598
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 436 tcagttgtccagtatcttctctccagaggattgatgaagaaggatgctagcttaagta 493
>gnl|LJGI|AV765169 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 573
Score = 168 bits (85), Expect = 3e-41
Identities = 296/369 (80%)
Strand = Plus / Minus
Query: 331 aaagtcgatgccttcaagacatggggctggtctgaagatactattctggatgcatttagg 390
||||| ||||| || |||| |||||| ||||||||||||||| || | ||||||||||||
Sbjct: 569 aaagttgatgctttgaagaaatggggttggtctgaagatactgttgttgatgcatttagg 510
Query: 391 agggatccccacattatgctaaactccatcggaaaagtaaatgcagtgatgagtttttgg 450
||| | ||| ||||||| ||| || | | ||| | ||||||||||||| ||| |||
Sbjct: 509 aggcaacccagcattatgttaaggtctactgagaaactcaatgcagtgatgaatttgtgg 450
Query: 451 gtcggccatcttggttgggacccttcagtgcttcaagctgtgccaacactttttggatat 510
|| | || ||||||||||| |||| | ||||| ||||| || | | | |||||||||
Sbjct: 449 gttgatcagcttggttgggatacttcggcgcttctagctgcaccgataatatttggatat 390
Query: 511 agtttggagaaaaggcttatgccaagggcttcagttgtccagtatcttctctccagaggt 570
|| |||||||| ||| |||| |||||||||||||||||| ||||||||||||| | ||||
Sbjct: 389 agcttggagaagaggattattccaagggcttcagttgtcaagtatcttctctctaaaggt 330
Query: 571 ttgatgaagaaggatgctagcttaagtagaccnnnnnnnnatagtgataagttgttcctg 630
|||||||||||||| |||||||||| || ||| | |||| || ||||||||
Sbjct: 329 ttgatgaagaaggaagctagcttaactacaccatttggtttgactgatgagctgttcctg 270
Query: 631 caaaaatatgtgaattgttttgaggaggaggaaacatctaagctactaagtctatatcat 690
||||| | ||||| ||||||||| ||||||||||||||| ||| ||||| || |||||
Sbjct: 269 caaaagttcgtgaactgttttgagaaggaggaaacatctaggctgctaaggctgtatcag 210
Query: 691 ggaggatgc 699
|||| ||||
Sbjct: 209 ggagcatgc 201
>gnl|LJGI|TC77615 weakly similar to UniRef100_A7NW61 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 482
Score = 101 bits (51), Expect = 6e-21
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 500 tttttggatatagtttggagaaaaggcttatgccaagggcttcagttgtccagtatcttc 559
||||||||| ||||||||||| |||| || | ||||||||||||||||| ||||||||||
Sbjct: 94 tttttggatttagtttggagacaaggattgttccaagggcttcagttgttcagtatcttc 153
Query: 560 tctccagaggtttgatgaagaaggatgctag 590
|||| | ||||||||||||||| | ||||||
Sbjct: 154 tctctaaaggtttgatgaagaaaggtgctag 184