Miyakogusa Predicted Gene

Lj2g3v3209730.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v3209730.1 Non Chatacterized Hit- tr|C6TEF7|C6TEF7_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,86.05,6e-35,no
description,AP2/ERF domain; AP2_ERF,AP2/ERF domain; DNA-binding domain
in plant proteins such as,,CUFF.39883.1
         (330 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77465 similar to UniRef100_Q5MJ54 Cluster: AT-rich el...   601   e-171
gnl|LJGI|TC79872 homologue to UniRef100_Q5MJ54 Cluster: AT-rich ...    70   9e-12

>gnl|LJGI|TC77465 similar to UniRef100_Q5MJ54 Cluster: AT-rich element binding factor
           2; n=1; Pisum sativum|Rep: AT-rich element binding
           factor 2 - Pisum sativum (Garden pea), partial (66%)
          Length = 1378

 Score =  601 bits (303), Expect = e-171
 Identities = 323/329 (98%), Gaps = 3/329 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaaagaggcagaggagtagcagctg---ctgcggcggcgatggtggtggaggtgaac 57
           ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||
Sbjct: 350 atgaaaagaggcagaggagtagcagctgctgctgcggcggcgatggtggtggaggtgaac 409

                                                                       
Query: 58  ggatcggcggtgcttaaggagccacgctaccggggggtcagggagaggccgtgggggaga 117
           ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 410 ggatcggcggtgcttaaggagccacgctaccggggcgtcaggaagaggccgtgggggaga 469

                                                                       
Query: 118 ttcgcggcggagatcagagacccgatgaagaaggcgagggtctggttaggcacgtttgat 177
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttcgcagcggagatcagagacccgatgaagaaggcgagggtctggttaggcacgtttgat 529

                                                                       
Query: 178 tctgcagaggaggcggcgcgtgcgtatgacgccgccgcacgcgctcttcgtggaccgaag 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tctgcagaggaggcggcgcgtgcgtatgacgccgccgcacgcgctcttcgtggaccgaag 589

                                                                       
Query: 238 gctaagacaaactttcctctctcacctttctgctaccaccaccccgccgccgcggatccc 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gctaagacaaactttcctctctcacctttctgctaccaccaccccgccgccgcggatccc 649

                                        
Query: 298 ttctactacgccgccgggaacaacggcgg 326
           |||||||||||||||||||||||||||||
Sbjct: 650 ttctactacgccgccgggaacaacggcgg 678


>gnl|LJGI|TC79872 homologue to UniRef100_Q5MJ54 Cluster: AT-rich element binding
           factor 2; n=1; Pisum sativum|Rep: AT-rich element
           binding factor 2 - Pisum sativum (Garden pea), partial
           (23%)
          Length = 618

 Score = 69.9 bits (35), Expect = 9e-12
 Identities = 101/123 (82%)
 Strand = Plus / Plus

                                                                       
Query: 85  taccggggggtcagggagaggccgtgggggagattcgcggcggagatcagagacccgatg 144
           |||||||| |||||  |||| || |||||  | ||||| || |||||||||||||| |||
Sbjct: 493 taccggggcgtcagaaagagaccatggggccggttcgccgccgagatcagagaccctatg 552

                                                                       
Query: 145 aagaaggcgagggtctggttaggcacgtttgattctgcagaggaggcggcgcgtgcgtat 204
           ||||| || ||||| ||| | || ||||| ||  | |||||||| |||||||||||||||
Sbjct: 553 aagaaagccagggtgtggctcggaacgttcgacaccgcagaggacgcggcgcgtgcgtat 612

              
Query: 205 gac 207
           |||
Sbjct: 613 gac 615