Miyakogusa Predicted Gene
- Lj2g3v3188470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3188470.1 tr|D7ME85|D7ME85_ARALL WRKY DNA-binding protein
31 OS=Arabidopsis lyrata subsp. lyrata GN=WRKY31
PE=,33.33,0.000000004,WRKY DNA-binding domain,DNA-binding WRKY;
seg,NULL; coiled-coil,NULL; DNA binding
domain,DNA-binding,CUFF.39855.1
(1419 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AU240092 similar to UniRef100_A9RAB7 Cluster: WRKY1; n=... 595 e-169
gnl|LJGI|TC59629 similar to UniRef100_A7QUJ4 Cluster: Chromosome... 325 4e-88
gnl|LJGI|TC78623 homologue to UniRef100_A7LHH6 Cluster: WRKY36; ... 100 5e-20
gnl|LJGI|GO036133 similar to UniRef100_A7LHH6 Cluster: WRKY36; n... 96 7e-19
gnl|LJGI|TC58147 similar to UniRef100_A7LHG6 Cluster: WRKY23; n=... 58 2e-07
>gnl|LJGI|AU240092 similar to UniRef100_A9RAB7 Cluster: WRKY1; n=5; Coffea|Rep: WRKY1 -
Coffea racemosa, partial (29%)
Length = 300
Score = 595 bits (300), Expect = e-169
Identities = 300/300 (100%)
Strand = Plus / Plus
Query: 912 gcagcatagccatcctctgcctccaacagcacaagcaatggcatcaaccacatctgcagc 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagcatagccatcctctgcctccaacagcacaagcaatggcatcaaccacatctgcagc 60
Query: 972 agcctcaatgcttctctcaggatcaatgccaagtgcagatcatggcctaatcaatccaac 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcctcaatgcttctctcaggatcaatgccaagtgcagatcatggcctaatcaatccaac 120
Query: 1032 catactagaaactgcttcacttcactcctcagcacaacaaaacatggcaactctctcagc 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catactagaaactgcttcacttcactcctcagcacaacaaaacatggcaactctctcagc 180
Query: 1092 ctcagcaccatttccaaccatcactcttgatctcactcaaactgattccaccaattcctc 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcagcaccatttccaaccatcactcttgatctcactcaaactgattccaccaattcctc 240
Query: 1152 acaacaattacagagtgatcaacaacagagccaacttagcctcttaactccacttctagc 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaacaattacagagtgatcaacaacagagccaacttagcctcttaactccacttctagc 300
>gnl|LJGI|TC59629 similar to UniRef100_A7QUJ4 Cluster: Chromosome chr10 scaffold_179,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_179, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 1579
Score = 325 bits (164), Expect = 4e-88
Identities = 322/374 (86%), Gaps = 3/374 (0%)
Strand = Plus / Plus
Query: 680 catctgaaaccatgtcaatgatcaagaaagctcgtgtatcagttcgagcaagatcagaaa 739
|||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 683 catccgaaaccgtgtcaatgatcaagaaagctcgcgtatctgttcgagcaagatcagaat 742
Query: 740 cttcaatgattgcggatggatgcaattggaggaagtatgggcaaaaaatggctaaaggga 799
| ||||||||| | |||||||| | ||||| ||||||||||| || ||||| |||||||
Sbjct: 743 catcaatgattccagatggatgtcaatggagaaagtatgggcagaagatggcaaaaggga 802
Query: 800 atccttgtccaagagcttattatcgttgcaccatgagtactggttgtccagtaagaaaac 859
|||||||||| ||||||||||||||||||| || | |||| ||||||||| | ||||
Sbjct: 803 atccttgtcctcgagcttattatcgttgcacaatcgggactgcttgtccagttcgtaaac 862
Query: 860 aagtccaaaggtgtgctgaagatagaagtgtgttgatcacaacttatgaagggcagcata 919
|||| |||||||||||||||||| |||||||||| ||||||| ||||||||||| ||||
Sbjct: 863 aagtacaaaggtgtgctgaagatcgaagtgtgttagtcacaacatatgaagggcaacata 922
Query: 920 gccatcctctgcctccaacagcacaagcaatggcatcaaccacatctgcagcagcctcaa 979
||||| || ||||| || || | |||||||||||||||||||||||||| || ||||
Sbjct: 923 accatcaactccctcccactgccaaggcaatggcatcaaccacatctgcagctgcatcaa 982
Query: 980 tgcttctctcaggatcaatgccaagtgcagatcatggcctaatcaatccaaccatactag 1039
||||||| |||||| ||||||||||||||| ||||| |||| || |||||||||||||
Sbjct: 983 tgcttctttcaggagcaatgccaagtgcag---atggcataataaacccaaccatactag 1039
Query: 1040 aaactgcttcactt 1053
||| ||| ||||||
Sbjct: 1040 aaagtgcatcactt 1053
Score = 56.0 bits (28), Expect = 6e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1294 aatgcagctacagctgctatcacttcagacccgaatttcactgcaactcttgtagcagct 1353
||||||||| | | |||||||||| ||||||| || ||||| ||||||||||| || ||
Sbjct: 1288 aatgcagctgctgttgctatcactgcagacccaaaattcacagcaactcttgtggctgcc 1347
Query: 1354 ataacatc 1361
||||||||
Sbjct: 1348 ataacatc 1355
>gnl|LJGI|TC78623 homologue to UniRef100_A7LHH6 Cluster: WRKY36; n=1; Glycine
max|Rep: WRKY36 - Glycine max (Soybean), partial (73%)
Length = 1098
Score = 99.6 bits (50), Expect = 5e-20
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 766 tggaggaagtatgggcaaaaaatggctaaagggaatccttgtccaagagcttattatcgt 825
||||| ||||||||||| |||||||| ||||| || || ||||| ||||||||||| |
Sbjct: 136 tggagaaagtatgggcagaaaatggccaaaggaaacccatgtcctagagcttattacaga 195
Query: 826 tgcaccatgagtactggttgtccagtaagaaaacaagtccaaaggtgtgctgaagataga 885
||||||||| | ||||||| ||||| |||||||| || ||||||||||||||||| |||
Sbjct: 196 tgcaccatggctgctggttgcccagtcagaaaacaggtacaaaggtgtgctgaagacaga 255
Query: 886 agtgtgttgatcacaacttatgaagg 911
| | |||||||||| ||||||||
Sbjct: 256 acaatactgatcacaacatatgaagg 281
>gnl|LJGI|GO036133 similar to UniRef100_A7LHH6 Cluster: WRKY36; n=1; Glycine max|Rep:
WRKY36 - Glycine max (Soybean), partial (33%)
Length = 647
Score = 95.6 bits (48), Expect = 7e-19
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 766 tggaggaagtatgggcaaaaaatggctaaagggaatccttgtccaagagcttattatcgt 825
||||| ||||||||||| |||||||| ||||| || || ||||| ||||||||||| |
Sbjct: 487 tggagaaagtatgggcagaaaatggccaaaggaaacccatgtcctagagcttattacaga 546
Query: 826 tgcaccatgagtactggttgtccagtaagaaaacaagtccaaaggtgtgctgaaga 881
||||||||| | ||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 547 tgcaccatggctgctggttgcccagtcagaaaacaggtacaaaggtgtgctgaaga 602
>gnl|LJGI|TC58147 similar to UniRef100_A7LHG6 Cluster: WRKY23; n=1; Glycine max|Rep:
WRKY23 - Glycine max (Soybean), partial (61%)
Length = 2162
Score = 58.0 bits (29), Expect = 2e-07
Identities = 104/129 (80%)
Strand = Plus / Plus
Query: 706 aaagctcgtgtatcagttcgagcaagatcagaaacttcaatgattgcggatggatgcaat 765
|||||||| || |||||||| || |||||||| |||| ||||| ||||||||| |
Sbjct: 1001 aaagctcgcgtctcagttcgtgctcgatcagaagcttccatgatcagtgatggatgccaa 1060
Query: 766 tggaggaagtatgggcaaaaaatggctaaagggaatccttgtccaagagcttattatcgt 825
||| | |||||||| ||||||||||| ||||| ||||| ||||| |||| ||||| |
Sbjct: 1061 tggcgaaagtatggacaaaaaatggcaaaaggaaatccatgtcctcgagcatattacaga 1120
Query: 826 tgcaccatg 834
|||||||||
Sbjct: 1121 tgcaccatg 1129